Oncorhynchus gorbuscha (pink salmon): 124015353
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Entry
124015353 CDS
T07892
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124015353
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124015353
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Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
UNC45-central
HTH_RNase_II
HEAT_Maestro
CBP1_cbp8
Motif
Other DBs
NCBI-GeneID:
124015353
NCBI-ProteinID:
XP_046186487
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All DBs
Position
LG26:29906031..29917455
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AA seq
1366 aa
AA seq
DB search
MMNRPKPTTIRRPSAVKPSGHPPPGNFIALGSKSGGESKAPAVLLKPASTLPTDRKRETS
SSLPSSSGLSGLVKRPKISSTPPVSALGRLADVAAVDKRAISPSIKEPSVVPIEVPPAVL
LDEIENAEQDGNDDRIEGVLCGAVKQLKMNRAKPDITLYLSLMFLAKIKPNLFATEGIIE
ALCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKNFVDNIQTAFSTKMPPKSMLLQLQTDTGRSGGDISAGSSPHPSTPDEDDSQTELL
IAEEKLSPEDDGQVMPRYEELSESVEDYVLDVLKDQLNRRQPMDNVSRNLLRLLTATCGY
KEVRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNSHGADDMEVISNLIKIRLKPKVIL
NHYMLCVRELLNAHKDNLGTMVKLVIFNELSNARNPNNMQVLHTLLQHSPEQAPKFLAMV
FQDLLTNKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEATYVDMEFKERFVIQ
VTDLLTCSMMLGITAQVKEAGVAWDKGEKKNLDGLRSFQNNIAAIQRDAVWWLHTVVPTI
AKVPSKDYIHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIG
LSRDLPLGPADAMELADHLVKRAAGVQSDGTTSATAMDLDVLRVERIQLIDAVLNLCTYH
HPENIQLPAGYTPPNLAIATLYWKAWLLLLVVAAFNPQQIGLAAWDGYPTLKMLMEMVMT
NNYSYPPCTVADEETKTEMINRELQVSQKEKQEILAFESHLAAASTKQTITESNSLLLSQ
LTSLDPQGPPRKPPPAVQEQVKSLNHSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLA
DLVQSSEGSLDVLPVQCLCEFLLHDAADDNLPIEDDEEGESKEQRAKKRQRQQKQRQLLG
RLQDLLLGPKADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGGLKDGEERDQP
MEEDSRDAELLPGYQWLLQDLPKLPLFDSVRGMTSTALQQAIHMETDPQTINAYLIYLSQ
HAPVEEQASHNDLALDVARLIVERSTIMNSLFSKYSCRPESDAVLSALISIFSSYIRRMR
KTKEGEDLYSWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKEESDFFNLLDIW
FPDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVARLVDAALQDLEPQQLLLFVQSFGI
PVSSMSKLLQYLDQAVSHDSQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHGLLSSSLP
PRRDSTEVNRAKVTVETLSCSLKMRANQIPVIGPEDDLTGNLRPRG
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgtcccaagcctacaacgattaggcggcctagtgctgtgaaaccctccggt
caccctcctccaggaaatttcatagcattggggtcaaagagtggcggagagtccaaagca
cctgcagttctccttaaaccagcgtccaccttacccactgaccgtaaacgagagacctcc
tcgtcacttccatcctcctctggcctgtccggcctagtgaagcgccccaagatctcctct
acccctccggtcagcgccctaggacgattggctgatgtggcagcagtggacaaaagggct
atatcgccttcgatcaaggagccctcagtggtgcccatagaagtccccccagcagtgctc
ctagatgagattgagaatgcagagcaggatggaaatgatgatcgcattgaaggggtgctc
tgtggagctgtcaaacagctgaagatgaaccgggccaaacctgacataacactatacctc
agcctcatgttcctggccaagattaagcccaatctctttgccactgaaggcattattgag
gccttgtgcagtctccttcgtcgggatgcctccatcaacttcaaagcaaagggcaacagt
ctggtgtctgtgctagcctgcaacttgctgatggcagcgtatgaggaggatgagaactgg
ccagagatctttgtcaaagtgtacattgaggactctttgggggagcgaatttgggtagac
agttcccattgtaagaattttgtggacaatatccagactgccttcagtaccaaaatgccc
ccaaagagtatgctgctgcagttgcagactgacactggccgctccggtggagatatcagt
gcagggagcagtcctcacccctccaccccagatgaggatgacagccagaccgaattgctg
attgctgaggagaaacttagccctgaagatgatggacaagttatgccaaggtacgaggag
ctgtctgagagtgtggaggactatgttctagatgtcctgaaggaccagttgaaccgcagg
cagcccatggacaatgtgtcccgtaacctgctgcgtctgctcactgccacctgtggctac
aaggaggtgcggcttatggctgtgcagaggctggagatgtggctgcagaatccaaagctg
acccgtccagctcaggaccttctcatgtctctctgtatgaactgcaactcccatggagcg
gacgacatggaggtgatctccaacctcatcaagatccgcctgaaacctaaagtcatcctc
aatcactacatgctctgtgtcagggagctgctgaatgcacacaaagacaacctgggaacc
atggtgaagctggtgatcttcaacgagctgtccaatgccaggaaccccaacaacatgcaa
gtccttcacacactgctccagcacagcccagagcaggctcctaagttcctggccatggtg
ttccaggacctgctgaccaataaggatgattacctgcgtgcctctcgagccttgctgaga
gagatcatcaaacagaccaagcacgagatcaacttccagtccttctgcctgggtctgatg
caggaaaggaaggaggccacctacgttgacatggagttcaaagaacgctttgtgatccag
gtgacagacctgctcacgtgctccatgatgctgggcatcacagctcaggtcaaggaggct
ggcgttgcgtgggacaaaggagagaagaagaatctggatggtctgagatcctttcagaat
aatatcgctgccattcagagggatgctgtgtggtggcttcacactgttgttcccactatt
gccaaagtgccatccaaggactatatacactgtcttcacaaggtgcttttcacggagcaa
ccagagacctactacaagtgggataactggccccctgagagcgacagaaatttcttcctg
cggctgtgctcggaagtgcctctgctggaggacactctaatgcgcatcctggtcatcgga
ctgtcccgtgaccttcctctgggcccggccgacgccatggagctggcggaccacctggtg
aagagggcagccggggtccagtccgatggtacaacatctgcaacagcaatggatctggat
gttttgagagtggagcggatccaactgattgacgcagtgctgaacctgtgcacctaccac
cacccagagaacattcagctgcctgcgggctatactcctccgaacctggcgatagccaca
ctctactggaaagcgtggctcctgttacttgtggtggccgctttcaatccacagcaaata
ggcttggctgcctgggatggctatcccacactgaaaatgctcatggagatggttatgaca
aataactactcctaccctccatgtacggtggccgatgaggagaccaagaccgagatgatc
aacagggagctgcaggtgtcccagaaagagaagcaggagatcctggccttcgagagccac
ctggcggctgcctccaccaagcagaccatcacagagagcaacagcctactgctgtcccag
ctcaccagtctggacccacagggcccccctcgcaaacccccacccgcagtccaggagcag
gtgaagagccttaaccactcccttcgcctgggtcacctcctctgtcgctctcgcaaccct
gacttcctgctcaacatcatccagagacaggcctcctctcagtcaatgccctggctggct
gacctggtgcagtccagtgaggggtccttggatgtgctgcccgtgcagtgcctgtgtgaa
ttcctgcttcacgatgctgcagatgacaacttgcccatcgaggatgacgaggaaggagag
agcaaagagcagagagccaagaaaagacaaaggcaacaaaagcagaggcagctccttgga
cggctgcaggatctgctgttgggtcctaaagctgacgaacagaccacgtgtgaggtgttg
gactacttcctgcgccgcctcagctcttctcaagtggcgtcaagagtcctggctatgaag
ggtctgtcgctggtgctgactgaggggggtctgaaggatggagaggagagggaccagccc
atggaggaggactccagagatgctgagctcctgccaggctaccagtggctcctgcaggac
ctccccaagcttcccctgttcgacagcgtccggggcatgacctccaccgctctgcagcag
gccatccacatggagacagacccacagaccatcaacgcctacctcatctacctgtcccag
catgcaccagtggaggagcaggcatctcacaatgacctcgctctggatgtggcccgtctg
attgtcgagcgctccaccatcatgaacagcctgttctccaagtactcctgccggcccgag
tcagacgccgtgctctcagccctcatctccatcttctccagctacatcaggaggatgagg
aagaccaaagagggagaggacctctacagctggtcagaatctcaggaccaggtgtttctg
cgttggaccacaggagagacggccaccatgcacattctggtggtccatgccatggtcatt
ctcctgacgctcgggccacccaaagaggagagtgacttcttcaacctcctggacatctgg
ttccccgacaagaaacccctccccaccgccttcctggtggacacctccgaggaggccctg
ctgctacctgattggttgaagctgaggatgatccggtcagaggtcgcacgattggtggat
gcagcgctgcaggatctggagccccagcagctgctgctgtttgtccagtcgtttggcatc
cctgtgtccagtatgagtaaactgctgcagtacctggaccaggctgtatcccacgactca
cagacactggaacagaacatcatggacaagaactacatggctcatctggtggaggtgcag
catgagcgaggcgccacaggggggcacactttccacgggttgctcagctcctctctccct
cctcgcagagatagtactgaggtgaacagagccaaagttaccgtggaaactcttagttgc
tccttgaagatgagagccaatcagatcccagtgattgggcctgaggatgacctcaccggg
aacctgcgacccagaggttaa
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