Oncorhynchus gorbuscha (pink salmon): 124016185
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Entry
124016185 CDS
T07892
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03272
Virion - Hepatitis viruses
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124016185
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124016185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124016185
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124016185
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GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
Motif
Other DBs
NCBI-GeneID:
124016185
NCBI-ProteinID:
XP_046187679
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All DBs
Position
LG26:36029452..36041488
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AA seq
880 aa
AA seq
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MGRLLCVLLVFLACCVVKTNTETVCGIGQFLCGNGKCITLRWVCDDTDDCGDGTDELPGT
CSARTCGTTEFSCGGRLNQCVPSTWLCDGKADCENGADEESCAPKHCTDNKFHCSNGQCV
SASFVCDEELDCDDGSDEASCPPTTCSSTSFQCNNSVCVPHLWACDGDADCSDGSDEWPQ
NCGTRDPEGAPKPCSLREFQCGSGECIHSSWKCDGGFDCLDRSDETNCSRLTCRPDEFQC
GDGTCIHGGRQCNRQYDCRDLSDEMGCVNVSHCKGPTRFKCRSGECISMEKVCDKQRDCR
DWSDEPLRECDSNECLYNNGGCSHICNDLKFGYECQCPTGYYLTDKKRCEDIDECANPDI
CSQICVNHMGSYKCECEEGYQVDPATKACKAIGTVAYLFFTNRHEVRKMTLDKSEYTRVI
PHLKNAVALDMDMVAKEIYWSDLSQKKIYSTSMDLAADTAQHKVVIDSDIEAPEGIAFDW
VHGNIYWTDSIRSSISVSTANGSRRKTLFRNDLAKPRAIVVDPHSNFMYWTDWGTPAKIE
KGGLNGGDRAALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEH
RLAHPLGITVFEERVFWTDVSNNAILSANRVTGRDIKPVAEHLVSPEDIVLYHNLKQPTG
RDWCKVANGGCEFMCLAAPQVGLHSPKYTCACPDNMLLAKDMRKCVPAVPTPATPVKPIV
PSPNPPPAPVRTSPAPPARATTKAPIIATTVTPAPPRTTKPVPRNPQPAQPDTPRIPQAQ
TTTVPQVTTQDIHHEFAAIPTVPSTPAALYIALPIAIVCLVAFVAVLLWRNYRLKNTNTI
HFENPVYQKTTEDQVHICRSHSPDGYSYPPRQIVSLDDEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggacggctgctgtgcgtgctgttggtgttcctggcttgctgtgttgtcaaaacaaac
acagagacagtatgtgggatcgggcagttcctgtgtgggaacgggaagtgcattacgctg
agatgggtgtgtgacgacacagatgattgtggagatggaactgacgagctccccggaaca
tgctcggccagaacatgcggaaccacagagttcagctgtggtggacgtctgaaccagtgt
gttcccagtacctggctctgtgacggcaaagcagactgtgagaatggagctgatgaggag
agctgtgcgcccaagcactgcacagataacaaattccactgcagtaacggccagtgtgtg
tcggcctcctttgtgtgtgatgaggagttggactgtgatgacgggagcgacgaggcttcc
tgcccacccaccacctgtagctccacctccttccagtgcaacaactctgtatgtgtgccg
cacctgtgggcctgcgacggagacgctgactgctcggatggctctgacgagtggccccag
aactgtgggacgcgagaccctgagggtgcccccaagccctgctcccttcgggagttccaa
tgtggcagcggggagtgtatccacagcagctggaaatgtgatggaggattcgactgcctg
gatcgctctgacgagaccaactgtagccgcctcacctgccgccccgatgagttccaatgc
ggtgatggcacctgtatccacggcgggcgccaatgtaaccgccagtacgactgcagagac
ttgagtgatgaaatgggctgtgtcaatgtgagccattgcaagggtcccaccaggtttaag
tgccgtagtggggagtgcatcagtatggagaaggtgtgtgacaagcagcgtgactgcagg
gactggtcagatgagcctctcagggagtgtgattccaacgagtgcctgtacaacaatggc
ggctgctcacacatctgcaatgacctgaagttcggctatgagtgccaatgtcccaccggc
tactacctgacggacaagaaacgctgtgaagatatcgatgagtgtgccaacccagacatc
tgcagccagatctgtgtcaatcatatgggcagctacaagtgcgagtgtgaggagggctac
caggtcgacccagcgaccaaagcctgcaaggccatcggcactgtagcctatctgttcttc
accaatcgccatgaggtgaggaagatgacactggacaagagtgagtacacgcgtgtcatc
ccccacctgaagaatgcagtggctctggacatggacatggttgccaaggagatttactgg
tctgacctctcccagaagaagatctacagcacctcaatggacttggctgcagacacagcg
cagcacaaagttgtgattgacagcgacatcgaagctccggagggcatcgcctttgactgg
gtccacggcaacatctactggaccgacagcatccgcagcagcatctctgtgtcaaccgcc
aacgggagccgccgcaagactctcttccggaatgacctggccaagccccgcgctattgtg
gtcgacccccacagcaacttcatgtactggactgactggggaactccagccaagattgag
aagggaggtctgaacggaggagaccgtgctgctctggtcacagacaacattgtgtggccc
aatggaatcacccttgacctgctgaaccagcggctgtactgggtggactccaagctgcac
accctctccagtatcgacgtccagggtggcggccgaaggacactcattatagatgaacac
aggctagcccatcccctaggcatcactgtgtttgaggaaagagtgttttggacagatgtc
agcaacaatgccattctgagtgccaaccgtgtgacaggcagggacatcaagcctgtggca
gagcacctggtatccccagaggacattgtgttgtaccacaacctcaaacagccaactggc
agggactggtgcaaggtggccaacggaggctgtgagttcatgtgtctggcagccccccag
gtgggcctacattcccccaagtacacctgtgcatgccctgacaacatgctgctggccaaa
gacatgaggaaatgtgtaccagctgtaccaacacctgcaactccagtcaagcccattgtt
ccctcccccaaccccccaccggcacccgtccgcacctcccctgcacctccagcccgcgcc
accactaaggcccccatcatcgctaccacagttacgcctgcgcctccccgcactaccaag
cctgtgccacgcaacccccagcctgcccagccagatacacccaggatcccccaggcccag
actaccacagtgcctcaagtcaccactcaggacatccaccatgaatttgctgctataccc
acagtcccttcaacccctgcagctttatacatcgcgctgcctatagccattgtgtgtctg
gtggcatttgttgccgtgctgctgtggaggaactacaggctgaagaacaccaacaccatt
cactttgaaaacccagtctaccagaagaccactgaagaccaggtgcacatatgcaggagc
cacagtccagacggctactcctacccaccgagacagattgtgagtcttgatgatgaggct
tga
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