Oncorhynchus gorbuscha (pink salmon): 124016934
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Entry
124016934 CDS
T07892
Name
(RefSeq) plexin-D1-like
KO
K06822
plexin D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124016934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
124016934
NCBI-ProteinID:
XP_046188226
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MPPSEKIAVLILGVLVLESPWNAHHSLASALQIQQAFASQNQTNNFVVDEVSRKVYLATV
NMVYQLNGTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQGVL
VVCGSVYQGFCELRKMENISEIAVEFPPHGEKTVFPSMLNIAANHPNASTVGLIFRSHGG
NTRLLVGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSEDNV
FKIKQEVKQKNKLNFVHAFIQKSYAYIAINNDANMGHKQSQPNSILARICLDTENTRKST
SESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGSGEGLESHLFGVFTKSDRKSAL
CAFRFSDIEEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGAAH
LQHPLALRRPLRATPLFESLGLSSVAVDNIHNHTVVFLGTSTGRLRKLTLLKNLTVANQW
ALKLPAGESVHHIMTFDPMDRNYLYLMTSHHLLRVKVAACGQYRSCSDCLGAGDAHCGWC
TLESRCSIQRECSGGLMVRSWIGMGEGPQQCPSMTLTPQEISLSADIKDVGILINGSVPD
LVGSRVECDYGLGVATIATVHLDYGPAQIQTCPLLPRERYPHIPPGRDHLMVPVAIKVNG
TSVVSGTFLIYDCERTGAIHPKIACISCLSTRWRCYWDQNSHSCLSTKDDSKPSLLENSA
SCPSLVAKDVPPSPSGITQDFTLSLSNVEQQEELECDFGSEQRYEARWLNSVSEVKCSGV
MLTTVERSQVFQLSLRRKGHLDKYIDSPKPMNVEVYNCGVGSGDCSQCWGREDQGHLCGW
CDNICRTRDDCQYMSSQCPDPEITKISPLSGPLEGGTLLTVQGRNMGRRAGVVKVSIGMV
PCKILPYRYTVSVQLVCVSGQTFDPANDVVRVTVNQNAMGVSKEVFSYLVPKLLSMKPSK
GSRSGGTRVTLRGEYLDTGSQVRVKVNGTQDCTILTLTKDTIECTIPAALHTHTEAVSVC
VEFEDIPCQSAELLTQYIYEKNPTISYIKPRKSYLSGGRTITVTGQGFDLVQSVSMEVLG
IGQDACKVQSPSMITCSSPASSQSQQATVEFLLNGVLYTGDGPAFDGPDQEEEEEPRGGH
FLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSDLELAPEEYSVMIGSYPCDISFH
NNQLFHCTINGSLGSSEGELPVTVRVGNFERIIAKVQLGGSELAIVVSIVVCCVLLLLCT
VALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIP
FLEYKQFVTRTFFPKMCSDYERSLVQPVYENDALGPRALPETHPLLQDWQPSNTAKPNME
EGITLFSTLLNNKHFLVTFVHALEQQKDFAIRDRCSLASLLTIALHGKLEYYTSIMKDLL
VDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINK
GSIDAITGKARYTLNEEWLLRENVEAKPQNINVSFQGCGMDSLAVKVVNTDTICQVKEKI
LEAFYKNLPFSQWPRAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIPEG
ASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDEPFENKKSHRQSHRKKVLPEIYLTRL
LSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNCL
PLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSVSDLQLGKDSPTNKLLYAKE
IPEYKKRVQCYYKQIHEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYRNQ
VVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggaaaagatagcagttctgattctcggcgttctggtgctcgaatcgccc
tggaatgcccatcacagccttgccagcgcgctacagatccaacaggcgttcgcctctcaa
aaccagacaaataacttcgtggtggatgaggttagcagaaaagtctacctggctacggta
aacatggtgtaccagcttaacgggaccctgagcgtagaagtggagaagagaacggggccg
gtggaggacaacctgttgtgccatgcgccgcagctgccccaggcgccctgcgagcacccc
aaatccctcaccgacaacttcaacaagctgctcgaactggacagggagcagggggtgctg
gtggtatgcggctcggtgtaccagggcttttgtgagctcaggaagatggaaaacatatcg
gagatagccgtggagttcccccctcatggcgagaagaccgtgttccccagcatgctgaac
atcgccgccaaccaccctaacgcctccaccgtggggctcatcttcaggagccacgggggt
aacacccggctcctcgtcggggccacttacaccggggctgggacccagtttttccccaag
aaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgcaattcggtccctg
aacatcaatgatttatccaggctgttcacctatgacatcaacccgtccgaggacaacgtc
ttcaagatcaaacaggaggtgaagcagaagaataaactcaacttcgttcatgccttcatc
cagaagagctacgcttatattgctattaacaatgacgcgaatatgggccacaagcagagc
cagccgaacagcatccttgcaaggatatgcctggacactgagaacacacgaaaatccacc
tcggaaagccgaaagctcactgagtccttcatccagatgccacttcagtgtggatataac
ggaaacatctacaaccggctggtctccgttcaccccgcggaaatccactccgggagcgga
gaggggctggaatcgcaccttttcggagtgttcaccaaatcagacagaaagtctgccctg
tgcgcttttcggttctcagatatcgaggaggagatccgtcagggccggaggaactgctca
aactcccccagcagcgatgtgcaggtgctggacagcgtcatccagggttcgggcgcagca
tgcgtacacaaagggaaccttgtgctgcaaccggagcaactggactgtggagcggcccac
ctgcagcacccgctggccctacggaggcccctgagggccacgcccctgtttgagtccctg
ggcctcagctcggttgctgtggacaacatacacaaccataccgtggtgtttctgggcacc
agcacaggacgattgcgcaagctgaccctcctgaagaacctgactgtggccaatcagtgg
gctctgaagcttccagctggcgaatcagtgcaccacatcatgacctttgatcccatggac
cggaactacctgtacctcatgacctctcaccatctcctgagggtgaaggtagcagcatgt
ggccagtacagatcctgcagtgactgtttgggtgccggcgacgcccactgtggctggtgc
acgctcgagagcaggtgttccatccagagggagtgttccggggggctgatggtgcgctcc
tggatcggaatgggtgagggtccccagcagtgcccctccatgaccctcactccccaagag
atcagcctctccgctgacatcaaggatgtgggcattctgataaacggtagtgtccctgac
ctggttggttcccgggtagaatgtgactacggattgggcgttgccaccattgcaactgtg
cacctggactatggccccgcccagattcagacctgccccctcctgccccgggagaggtat
ccccacatcccccctggcagagatcacctgatggttcctgtggcgattaaggtgaatggc
acttctgtggtttccgggaccttcctcatctatgattgcgagaggacaggagcgatacac
cccaagattgcgtgtatcagctgtctaagcaccaggtggagatgttactgggaccaaaac
agccactcttgcctctccactaaagacgactccaaacccagcctgctagagaattctgct
tcctgtccaagccttgtggccaaggatgttccaccatcaccctcagggataacccaagac
tttaccctgtcgctaagcaacgtggagcagcaggaggagcttgagtgtgactttgggagt
gagcagcggtacgaggctcgatggctgaacagtgtctcagaggtcaagtgcagtggagtg
atgctgaccacagtggagaggagtcaggtgtttcagctcagcctgcggagaaagggacac
ctggacaaatacattgacagcccaaaacccatgaatgtggaggtgtacaactgtggggtc
ggcagtggggattgttcccagtgttggggacgtgaggaccagggtcatctgtgtggctgg
tgtgacaacatctgtagaactagggatgactgccagtatatgagtagtcagtgtcctgac
cccgagatcaccaagatctcccccctgagtgggccgttggaggggggcaccctgctcacg
gtacagggcaggaacatgggccgcagggctggtgtggtgaaggtctccatcgggatggtt
ccatgtaaaatcttgccctaccgatacaccgtctctgtacagctggtgtgtgttagtggt
cagacctttgatcccgcaaatgatgtcgtcagagttaccgtgaaccagaatgcaatgggg
gtgtccaaagaggtcttctcatacttggtccccaagctgctgtctatgaagcctagtaaa
ggctctcgttcagggggaaccagggtgaccctcaggggggagtacctggacactggctct
caggtcagagtcaaggtcaacggcacccaggactgcaccatactcacgctaaccaaagac
accatcgagtgcaccatacctgcggccctgcacacacacactgaggcggtgtcggtgtgt
gtggagtttgaggatattccctgtcagagcgccgagcttctcacccagtacatctatgag
aaaaaccccaccatcagctacatcaaacccaggaagagctacctcagtggcggtcggacc
atcacagtgacggggcaaggttttgacctggtgcagagcgtcagtatggaggtgctgggc
atcggacaggatgcctgtaaagtgcagtctccctccatgatcacatgctcctcccccgcc
tccagccaatcccagcaggccacggtagagttcttgctgaatggagttctctacacggga
gatggccccgcctttgacggcccagaccaggaggaagaggaggagcctcgcggaggtcac
ttcctgttggagtatgtggaagatcctcagttcttcaccgccaacaaagagaagctgatc
aaacaccaccctggggaaccactcacactcatcatcaataaaggaccgagcgatctggag
ctggcaccagaggaatactcagtgatgattggctcctatccctgtgacatcagcttccat
aacaaccagctgttccactgtaccatcaatggatcgctgggctccagtgagggagaactg
cctgtcacagtgcgggtgggtaactttgagaggatcatagccaaggtgcagctgggaggt
agtgagctggccattgtggtgtccatcgtggtgtgctgcgtgctgctgctgctatgcact
gtggctctagtggtgtactgtactaagagccggagggcggagcgctactggcagaagact
ctgctgcagatggaggagatggagtcccagatcagagatgagatccgcaaaggctttgca
gagctacagacagacatgacagacctgaccaaggagctgaaccgcagccagggaatccct
ttcctggagtacaaacagtttgtcacacgcaccttcttccccaagatgtgttcggactat
gagaggagtctggtccagcccgtctatgagaacgacgccctcggtccacgagccctccct
gagacacacccccttctgcaagactggcagccctctaacacagccaagcctaacatggag
gagggaatcactctcttctcaactcttctcaacaacaagcacttcctggttacctttgtt
catgcactggagcaacagaaggactttgcaatacgcgacaggtgtagcctggcatccctg
ctcactatcgccctccatggtaagctggagtactacactagcattatgaaggatctgctg
gtggatctgatcgatgcctcggctgccaagaaccccaagctgatgctgcgacggacagag
tctgtggtggagaagatgctcaccaactggatgtccatctgcatgtacagctacctcaag
gagacagtgggcgagcccttcttcctgctactgtgtgccatcaagcagcagatcaacaag
ggttctatagacgccatcacagggaaggcccggtacacactgaacgaggagtggctgctc
agagagaacgttgaggccaagccacagaacatcaacgtgtcgttccagggatgtggtatg
gactctctggccgtgaaggttgtgaacacagacaccatctgtcaggtgaaggaaaagatt
ctcgaggccttctataagaacctgcccttctcccagtggcctcgggcagaggacgtagac
ctggagtggtttgcttctggtagcaacagcaggatcctccaggacctggataacacctct
gtgatggaggatggcaggaagaaactcaacacagtcacacattaccagatcccagagggg
gcgtcattcgccatgagcatgaaagacaagagagacaacaccctggggagagccaaagac
ttggacacagagaaatatgtccatttggtcttgcctcatgatgagccgtttgagaataag
aagtcccacagacagagtcatcgtaagaaggtactccctgagatctacctaacccgcctc
ctctccaccaagggaacactgcagaagttcctcgatgacttgttccaggccatcctcagt
attcctgcagagcgtccgccgctggcaatcaaatacttctttgacttcctggaggagcag
gcggacaagaggggcatcaccgaccccgacaccctgcacatctggaagaccaactgttta
cctctgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacattgaaaag
acggaccacatggacgcctgtctgtctgtcattgcccaggccttcatagatgcctgctcc
gtttcagacctgcagctgggcaaggactctcccactaacaagctgctgtatgccaaggag
atcccagaatacaagaagagggtacagtgctattacaaacagatccatgagatggcgcca
ctgagtgagcaggagatgaatgcccacttggccgaggagtcacggaaatacagaaatgag
ttcaacaccaacctggccttgacggagatctacaaatatgccaagaaatacaggaaccag
gtggtgagtgctctggagtccaaccccacagcgaagcgtactcagctgcaccacaagttt
gagcaggtcattgctctggtggaggacaacatctatgagtgcagcagtgaggcctga
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integrated database retrieval system