Oncorhynchus gorbuscha (pink salmon): 124018624
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Entry
124018624 CDS
T07892
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00514
Other types of O-glycan biosynthesis
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124018624
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124018624
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124018624
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
124018624
Glycosyltransferases [BR:
ogo01003
]
Glycan extension
O-Glycan
124018624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Adeno_E3A
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
124018624
NCBI-ProteinID:
XP_046189920
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MHRRRMLRALPVFILMFFVVLIVDFQLRTRNLHKLNSIHNPFGGDLLRSIQETPLSAAKE
PPKPAKFPRQPAAVSTMNQTVGGLQAEIQRRRDKLRALEQRRVVITPSLLRLTDIFLAVK
STGRFHGTRLSLLLETWISKTKEHTFIFTDTEDEDINSRGYNVIVTDCPSDHSHQALSCK
MSAEYDHFMASDKKWLCHVDDDNYVNPGALLSLLSAFPQDSDVYVGKPSLDHPIKAHELL
EGNKTKEVQFWFATGGAGFCLSRRLAEKMAPWASGPRFEQTSAVIRLPDDCTVGFIVERR
LGISMVHSSMFHSHLENLLLLTPSNIPLQVTLSYGLFENKMNSVELNRLFSKEDDPSRFK
TVHCLLYPLTSWCP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaaggaggatgcttcgggcactccctgtttttatattaatgttcttcgtcgtt
ttaatagtggactttcaactaaggacgcggaatctccacaaactcaattctattcacaat
ccgttcgggggagacttactgcgctcgattcaagagacgcctctctccgcggcaaaggag
ccaccaaagccggccaagtttcctcgacaacccgccgctgtctctactatgaaccagact
gttggtggcttacaagcggagatacagagaaggagagacaagttgagggctttggaacag
agaagggttgtcatcactccatccctgttgaggttaacggacatcttcctcgcggtgaag
agcaccgggaggttccatggcacgcgcctctctctcctcctcgagacgtggatctccaag
accaaggagcatacgttcatctttacagacacggaggatgaagatatcaactccagaggt
tacaatgtgattgtgacagattgtccgtcggaccacagtcaccaggctctgtcctgtaag
atgtctgctgaatatgaccacttcatggcctccgataagaagtggctgtgtcatgttgac
gatgataactacgtgaatcctggagctcttctctccctgctctcagccttcccccaagac
agtgatgtctacgtgggcaagcccagcctcgaccaccccatcaaggcccatgaactactg
gagggcaacaagacgaaagaagtgcagttctggtttgccacgggaggagcaggcttctgt
ctgagtcgcagactagctgagaagatggctccatgggctagtggtcccaggtttgagcag
acgtcagcagtgatccgtctgccagatgactgtacagtaggcttcatcgtagagagaaga
ctggggatatccatggtccacagttcaatgttccactctcacctggagaacctgctactg
ctgacgcccagcaatatacctctacaggtgactcttagttatgggctgtttgaaaacaag
atgaacagtgtggagctgaatagactcttctccaaggaggatgatccctccaggtttaag
acggtccactgtctactctatccactgaccagctggtgcccttga
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