Oncorhynchus gorbuscha (pink salmon): 124025005
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Entry
124025005 CDS
T07892
Symbol
iars1
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124025005 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
124025005 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124025005 (iars1)
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
124025005 (iars1)
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124025005 (iars1)
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124025005 (iars1)
Prokaryotic type
Other AARSs
124025005 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
124025005
NCBI-ProteinID:
XP_046194666
LinkDB
All DBs
Position
LG03:5088061..5219619
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AA seq
1268 aa
AA seq
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MVEPVPESIHFPSEEKRILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLDIKGPDDVAKMGIAEYNRQC
RMIVMRYANEWETSVTRMGRWIDFKNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVCLIAWTTTPWTLPSNLALCVNS
ELQYVKVKDNSTGKVYIMMEARLVALFKTEEEYTIMDKFPGKTLKGKKYKPLFDYFRKCG
ETGAFQVVMDSYVREEEGTGVVHQAPYFGADDYRVCMENNICQRDQAPVCPVDSSGCFTD
EVTDFVGQYVKDADKNIIKWLKERGRLVNSGSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLANNDKCYWVPEFVRERRFGNWLRDARDWAVSRNRYWGTPIPLWCSDDFEEVVC
VGSMAELEALTGVKVTDLHRESIDQLTIPSRCGKGVLRRVSEVFDCWFESGSMPYAQAHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLVVENYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNIQRLHKEDGISFLYNEATAKRSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRFKGESGTEDCLGALENLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPTSVEEKDSSSIHYLMLPLVRESLIDKRIESAVCQMQSVIELGRVIRDRRT
LPVKYPLKEVVVIHQDPEALRDITSLQKYILEELNVRQLTLSTDKDKYGISLRAEPDHMV
LGKRLKGAFKSITASIKELKSEQLETFQETGSIVVDGQELHEEDLRLMYSFNQTSGSATQ
YEAHSDSQVLVLLDVTPDQSMLDEGVAREVINRIQKLRKKGHLVPSDEITVYYSCEPAGD
YLDSVIQAHTDFILATTKAPLKTYPVPKDSGVIVQEKTQLKGSDLDLTIVKGAAAXRAPL
TGPACAYINLQLKLNNKEQEGVVLLENPKGDICLDMAKLRQVCSSLFGLNNTELCVFNGK
TELTGKCDLLSLNGKTLLVTSGSNPSDSSPNSDSLVCPYVNLQLANCQPAECQSGDVGTL
LLVNPVGHNYLTHNALLSETAKLFGLRSRRLKLYLDDALTQEIPAEWSMKTLDRKTLYVG
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcctgttccggaatccatccacttcccttctgaggagaagaggatcctgcag
ctgtggaaggacaaggactgcttccaggagtgtctcaaacagtccaagaacaggcccaag
tacacgttctatgacgggcctccgttcgccacaggtctcccccactacggtcacatcctg
gcagggaccatcaaagacatcgtgactcgcttcgcccaccagagcggcttccacgtggac
cgccggttcggctgggactgtcacggcctgcctgtggagtatgagattgataagaccctg
gacatcaagggaccggacgatgtggccaagatggggattgctgagtacaaccggcaatgc
aggatgatcgtcatgagatacgctaacgaatgggagacctctgtaaccaggatgggacgg
tggatcgactttaagaacgactacaagactctgtacccctggttcatggagactgtctgg
tgggtgttcaggcagctgtatgataaaggtctggtgtaccgcggggtgaaggtcatgccc
ttctctaccgcctgtaacacgccgctgtccaacttcgagtcgaaccagaactacaaggat
gtgcaggatccgtcggtgatagtgaacttcccccttctggaagatgagaacgtgtgtctg
attgcctggacaaccacaccctggactctgcctagcaacctggctctctgcgtcaactca
gagttgcagtatgtcaaggtcaaagacaacagcactgggaaggtgtacattatgatggag
gccaggctggtagcactcttcaagaccgaggaggaatacaccattatggacaagttccct
gggaagacgctgaaggggaagaaatacaagccgctgtttgactatttcaggaagtgcggg
gagacgggggccttccaggtggtgatggacagttatgtcagagaggaggaggggacagga
gtggtccaccaggccccatactttggagctgatgattaccgtgtgtgtatggagaacaac
atctgccagagagaccaggctcccgtctgtcccgtcgactcctctgggtgcttcactgat
gaagttactgactttgtgggacagtatgtcaaggatgctgacaagaacatcatcaaatgg
ctgaaggaacggggtcgcctggttaacagcggctctttcaagcatagctaccctttctgt
tggagatctgacactcctctgatctacaaggctgttcccagctggtttattcgggtcgaa
cacatggtggagaagctgctggcaaacaatgacaaatgctactgggttcctgagtttgtg
cgggagcgtcgttttggtaactggctgagggatgcgcgtgattgggccgtttccaggaac
cgctattggggcacgcccatccccctctggtgcagcgacgactttgaggaggtggtgtgt
gtaggatccatggctgagctggaggcgttgacaggagtgaaagtaactgatctgcatcgg
gagagcattgaccagttgactatcccgtcccgctgtggtaaaggcgtgttgcgcagggtc
agtgaggtgtttgactgctggtttgagtcgggcagcatgccctacgcccaggcccactac
ccctttgagaacaggaaggagttcgaagacaccttccccgctgacttcattgctgagggc
atcgaccagaccagaggatggttctacaccctcctggtgttgtccaccgctctgttcgga
aaaccaccgtttaagaacgtcatcgtcaacggactggtgctggccagcgatggacagaag
atgagtaaacgcaagaagaactaccctgatccaggtctggttgtggagaactatggagcc
gatgccctgaggctctacctaatcaactccccggtagtgagagctgagaacctgcgtttc
aaagaggaaggagtcagagatgttcttaaggatgtgttcctcccctggtacaacgcatac
cgcttcctggtccagaacatccagcgtctccacaaggaggacggcatcagcttcctgtac
aacgaggccacagccaagcgcagtgacaacatcatggacaaatggatccagtccttcacc
cagtctctcatccagttcttcaaagctgagatggatgcttacaggctgtacacggtggtg
ccaaagcttgtcaagtttgtggacatgctgaccaactggtacgtgaggaccaaccgtagg
cgtttcaagggagagagtggaacagaggactgtctgggggctctggagaatctcttcagt
gttctgttctccatgtgcagactgatggctcccttcaccccatttattacagagatgatg
taccagaacctgcgtcacctgatcgaccccacctctgtagaggagaaggactccagtagc
atccactacctcatgttgcctctagtcagggagtcgttgattgacaagcgtatagaaagt
gcggtgtgtcagatgcagtctgtcattgagctaggacgagtcatcagagaccgcaggact
ctgcccgttaagtatcccttaaaggaggtggtagtgatccaccaagatccagaagctctg
agagacatcacctccctgcagaaatacatcctggaggagttgaatgtccgccagttgacc
ttgtccacggacaaagacaagtacggcatcagcctgcgggctgaaccggaccacatggtg
ctgggaaagaggctgaaaggagccttcaaatccattacggcgtccattaaagaactgaag
agcgaacagctggagaccttccaggagactggctccatcgtggtggacggtcaggagctt
catgaggaagacctgaggttgatgtacagcttcaaccagacctctggctcagcgacgcag
tacgaggcccattctgactcacaggtgctggtgctgttagacgtcactccagaccagtcc
atgctggatgagggtgtggctcgtgaggtcatcaaccgcatccagaaactacgcaaaaag
ggtcacctggtgccgtctgatgagatcacagtgtactacagctgtgagccggcaggtgat
tacctggacagtgtgatccaggcccacacagacttcatccttgcaaccaccaaggcacca
ctcaagacctaccccgtccccaaggactccggcgtcatcgtgcaggagaaaacacagttg
aagggttcggacctggacctgaccatagtgaagggagcagccgccnctcgagctcctctg
actggaccagcctgtgcctacatcaacctccaactcaaactcaataacaaggagcaagag
ggtgtggttctcctggagaaccctaaaggagatatctgtctggacatggccaagctgaga
caggtctgctccagtctctttggtctcaacaacaccgagctctgtgttttcaacggcaag
actgagttgactggtaagtgtgatctgctgtctctgaatgggaaaaccctgttggtgaca
tcaggctccaatcccagtgactcctctcccaactctgactcactggtgtgtccctacgtc
aacctccaactggccaactgtcagcctgctgagtgtcagagtggagatgtggggaccctg
ctgctggtcaatcctgtcggacacaactacctgacccacaatgctttgctgtctgagacg
gctaagttgttcggcctccgcagccgtaggctgaagctctacctggacgatgcgctcacc
caagaaatcccagcagagtggtcaatgaagacgctggacaggaagactctgtacgttgga
gttctgcccaccactgcagaggcatag
DBGET
integrated database retrieval system
