Oncorhynchus gorbuscha (pink salmon): 124026329
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Entry
124026329 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
ogo04144
Endocytosis
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124026329
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124026329
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124026329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124026329
04121 Ubiquitin system [BR:
ogo04121
]
124026329
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124026329
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124026329
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
HECT type E3
124026329
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
124026329
NCBI-ProteinID:
XP_046195334
LinkDB
All DBs
Position
LG03:complement(15135571..15174003)
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AA seq
859 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDDQSKKTEKCSNTHTPKWKQSLTVIVTP
FSKLIFRVWSHQTLKADFLLGVATLDMSETLKSNDMKLSEVVQILQLCSDHDNTDVVGDL
SICLDGVQVDPETFASAERDHAATAPNRDVRQNEDGGNRSSRDTSPSSDSTEDWVIIPNG
HEINCTGSPAPSPVGSKSTRPPRPARPPPPTPRRPAASPASSSSSTPSDVSEPPASDGSS
SDPPPENGAEPPPPQAASTSGPEAIGAPPAEGLPQLGPVSNGPLPPGWEQRVDQNGRMYY
VDHIEKRTSWNRPDSLPSGWERRVDPMGRVYFVDHISRTTTWQRPTQESVRNFEEWQHQR
SQLQGXMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGRVYFVHHTSRMT
QWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENGPQITY
VRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQIMSFHPQDLRRRLWIIFPGE
EGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFIGRF
IAMSLFHGKFIDTGFSLPFYKRILNKPLALKDLESIDTEFYNSLIWIKDNNLEECGLEMF
FSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEV
LPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFWQFVKEMDNEKR
MRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYE
QLKEKLMFAIEETEGFGQE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacaacttcaagtcactgttctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacgaccagtcgaagaagacagag
aaatgcagcaacacccacacccccaaatggaagcagtcactcacagtaattgtcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggcagacttcctattg
ggcgtggccacattggacatgagtgaaaccctcaagtccaatgatatgaaactctctgag
gtggtgcagatcttacagctgtgttcagaccacgacaacacagacgtggtgggagacctg
tccatctgtctggatggcgtgcaggtggacccagagacctttgcttctgcagagagggac
catgcagctactgctcccaacagggacgtgaggcagaacgaagatggaggcaacaggtcc
agcagagacacgtcaccttccagtgactctacagaggactgggtgatcatccccaatggc
cacgagatcaactgcacggggtctcccgccccatccccagtgggctccaagtccacacgc
ccacccagacctgctcgtcctcctccacccacccctcgcagaccagccgcctccccagcg
tcctctagcagctccactcccagtgacgtgagcgagcccccggcttcagacggctcctcc
tcagacccccctccggagaacggcgcagaacccccacccccacaggcagccagcaccagc
ggcccggaagccattggggcaccgccagccgaagggctaccccaactcggccctgtcagc
aacggcccactgccaccgggctgggagcagagggtggaccagaatgggcgcatgtattac
gtggatcacattgaaaagaggacgtcatggaaccgacccgattctctcccctctgggtgg
gagcggcgagtggacccaatgggcagggtgtacttcgtggaccacatcagccggaccacc
acgtggcagcgccctacgcaggagtcggtgcgtaactttgaggagtggcagcaccagcgc
agccagctgcaggggnccatgcagcagttcaaccagaggttcatattcgggctccaggat
cagcaaatagccgcagcaaacaaagagtttgacccgcttgggccgctgccacatggctgg
gagaagcgaacagacaccaacggcagggtatattttgttcaccacacatcgcggatgacc
cagtgggaggacccacggacgcaagggctgcttaatgacaagcctctacctgaaggctgg
gagatgaggttcactgtggacggcatcccctactttgtggaccacaacaggagaaccacc
acctacatcgaccctcgcacaggcaaatcctcccttgagaatgggcctcagatcacctac
gtcagggacttcaaagccaaagtgcagtacttcaggttctggtgccagcaactgtcaatg
ccacagcacatcaagatcaccgtcacccgcaaaaccctctttgaggattcattccagcaa
ataatgagctttcatccacaagatctcagacggaggctgtggataatattccccggagag
gaaggcttggactacggaggagtggcaagggagtggttcttcctgctgtctcatgaggtg
ctgaaccccatgtactgcctgtttgagtacgctgggaaggacaactactgtctccagatc
aaccctgcctcttacatcaaccccgaccacctcaagtacttcaagttcatcggacgcttc
atcgccatgtccttgttccatgggaagttcatcgatacgggattctccctgcccttctac
aagcgcatcctgaacaagcccctggccctaaaggacctggaatccattgacacggaattc
tacaactccctcatctggatcaaggataacaacctggaggagtgtggtctggagatgttc
ttctctgtggacaaggagatcctgggggaggttactactcacgagctgaagccggacgga
ggcaacgtactggtcactgaggagaacaaagaggaatacatcaggctggtggcagagtgg
aggttgtccagaggggtggaggagcagacccaggccttcttcgagggcttcaacgaggtc
ctcccccagcagtacctgcagtactttgacgctaaggaactggaggtgatgctgtgtggc
atgcaggagatagacctggtggactggcagaggcacaccatctacagacactatgctcgc
agcagcaagcagatcctctggttctggcagtttgtgaaggagatggacaacgagaaacgc
atgaggctgctacagtttgtcactggcacctgtcggctccccatgggtggcttcgctgac
cttatggggagtaatggaccacagaagttctgcatcgagaaggtgggcaaagaaaactgg
cttccaagaagtcacacttgctttaatcgactggacctgcccccctacaagagctacgag
caactgaaggagaagctgatgtttgccatcgaggaaactgagggcttcggacaggagtag
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