Oncorhynchus gorbuscha (pink salmon): 124031604
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Entry
124031604 CDS
T07892
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124031604
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
124031604
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
Atx10homo_assoc
Arm_2
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
124031604
NCBI-ProteinID:
XP_046199008
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All DBs
Position
LG03:56440494..56463928
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AA seq
751 aa
AA seq
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MMTMDPLKSAMSIGNVDETSLALPSDKKLRSKQQRVLDQVQTIKRGKSKYSKHGSVSSPT
TSPTSPVYINIFADSFKSPTSLNGGAFFNGTNGLSKTLSYEKSTKRRVVASKESTVQRNM
SSSSQWERRFPLSPTIGKHNSSRSVPDLAPFRTTTSTTTNMQQQLLQSSAPARQLQPNRS
SFFLTERNSSQVISNGNSSSQVAVKGNEVQKRNSQLIGTRQTKSSGQITSSQGRIERAPS
NLSVAESKISGIKIKGEAGINGNGQIADITMKEAVEYLSSGDENYQLCGASFIQHATYSE
DKAKQEVLRLKGIPPLVNLLRCPSPQVQQTASAALRNLAFKDAGNKEEVQRCGGITEALA
LLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGDETNNNQDPEV
FYHATACLRNLSCATQGNRQAMRNCRGLVDSLVSYVQRCVAAERPDDKSVENCVCVLHNL
SFQLESEAPALFSRINALARTPSRANAPSETGPIGCFSPQSSKVQDQESHFDYPVMEEQN
PKGAGWLFHSKTMQSYLSLLGSSQREETLEACSGALQNLTAYHGIVSSVISQSIVQKLNG
LPHISPLLQSSNPSLQKTAVSLVGNLAKNQRLQSTMARQTLPELVGILSSWTKEETECDD
TLAMACQTSHSLLMKEPELGKPLLTNKLVNSVNDLSKNRDFPKASKAAGVLLYSLWSEKD
VQSFLKKQGMNKGSFVNDITSAAHRSVQVIE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggatgagacatct
cttgctttgccatccgataaaaaacttcggtccaaacagcagcgagtcttggatcaggtg
caaaccatcaagaggggcaaatcgaagtacagtaaacatggatctgtgtcgtcgccaacg
acatccccaacgagtcctgtgtacatcaacatattcgctgactcctttaagtcacctacc
agtcttaatggaggtgccttctttaatggtacaaatggcctctcaaaaacgctcagctat
gagaaaagcaccaagcgaagggtcgtggcctctaaggaatctacggtccagaggaacatg
agcagctccagccagtgggagagacgattccctctcagccccaccataggcaagcacaac
agcagccgcagtgtgcctgatctggcccccttccgcaccactactagtaccaccaccaac
atgcagcagcagctactgcagtcctcggcccccgcccggcagctccagcccaacaggtcc
agcttcttcctgaccgagaggaacagcagtcaggtcatctcaaatggcaacagctcctct
caggtcgctgtcaaaggcaacgaggtgcagaaaaggaacagccagttgattggcacgcgt
cagacgaaaagtagtggccagattaccagcagccaaggtcgtattgagagggcaccctca
aacctctctgtggctgagtccaagatatcagggatcaagatcaagggtgaagcggggatt
aatggtaatggtcagatagctgatataaccatgaaggaggcggtggagtacctgtccagt
ggagatgagaactaccagctctgtggagcctccttcatccaacacgctacctactcagag
gacaaggccaagcaggaggtgttgcggctcaaagggatcccccctttggtgaacctgctt
aggtgtcccagtccccaggtccaacagactgcctccgccgccctgcggaacttggccttt
aaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatcactgaggcactggcc
ctgctccgagacacagactctaccgagacacagaaacaactcacaggtctcctttggaac
ctgtcatctgcagacagtctgaagccagagctggtgcgtagtgctctgcctgtcctgact
gagactgtggtagtaccatacactggagatgagacaaacaacaaccaagacccagaggtc
ttctaccatgctacggcatgtctacgaaacctgagctgtgcgactcaaggcaacaggcag
gccatgcgtaactgtcgaggcctcgtcgactctctggtcagttatgtccagcgttgtgtg
gctgcagagaggccagatgacaagtctgtggaaaattgtgtgtgtgtcttgcacaacctg
agcttccagctggagagtgaagccccggccctcttcagcaggatcaatgccctggccagg
acccccagcagggccaacgcccccagtgagaccggccccattgggtgcttcagcccacag
agcagcaaggtccaggaccaggagagtcactttgactaccctgtgatggaggagcagaac
cctaaaggagcaggctggctcttccactccaagaccatgcagagttacctgtctctgctg
gggtccagccagagagaagagaccctggaggcctgctctggagccctgcagaacctcact
gcttaccatggcattgtatctagtgtgataagccagagcatcgtgcagaagctgaacggc
ctgcctcacatctctcccttgctgcagtcctccaaccccagcctccagaaaactgctgtg
tctctggtagggaacctggccaagaaccaacgtcttcagagcaccatggcccgacaaacc
ctaccagagctagttggcatcctcagctcatggaccaaggaagagacagagtgtgatgac
accctggccatggcgtgccaaaccagccacagtctgctgatgaaggagcccgagctgggg
aaacccctgctgaccaacaagctggtcaactcagttaacgacctgagcaagaacagggat
ttcccaaaggccagcaaagctgcaggtgtgctcctctacagcctctggtcagagaaagac
gtacagagtttcctaaaaaagcaagggatgaataagggttcctttgtgaacgacatcacc
agtgcagctcatcggtctgtgcaggtcattgagtaa
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