Oncorhynchus gorbuscha (pink salmon): 124031648
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Entry
124031648 CDS
T07892
Name
(RefSeq) plexin-D1-like
KO
K06822
plexin D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124031648
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Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
124031648
NCBI-ProteinID:
XP_046199101
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All DBs
Position
LG03:complement(60312469..60441043)
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AA seq
1900 aa
AA seq
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MPPSEKIVVLIFGVLVLESSWNAQHSPWLASALQIQQAFASPNQTNNFVVDEVSRKVYLA
TVNMVYQLNRTLSAEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQG
VLVVCGSVYQGFCELRKMENISQIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFRSH
GGNTRLLVGATYTGVGTTFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSED
NVFKIKQEVKQKNKLNFVHAFIQKTYSYIAINNDANMGHKESQPNSILARICLDTENPRK
STSESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGTREGLESYLFGVFTKSDRKS
ALCAFRFSDIEEEIRQGRRNCSNSPSSEVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGA
AHLQHPLALQRPLRATPLFESLGLSSVAVDDVHHHTVVFLGTSTGRLRKLTLLKNLTVAN
QWALKLPAGESVHHIMTFDPIDRNYLYLMTSHHLLRVKVAACSQYRTCSDCLGAGDAHCG
WCTLESRCSIQRECTWGPLARSWIGMGEGPQQCPSMTLTPPEISLSTDIKDVGILINGSV
PDLVGSRVECDYGLGVATAATVHLDYGPAQIQTCPLLPRERYPNIPPGRDHLTVPVAIKV
NGTSVVSGSFVIYDCERTGAIHTKTACISCLSTRWRCYWDQDSHSCLSSKDDSKHSLLEN
ATFCPSLVAENVAPSPSGMTQNFTLFLDNVVQGEELECDFGNKQRYDSRWLEDSSGVKCS
GVTLTTVEKSQVFQLSLRRKGHLDKYIDSPKPVTVEVYNCGVGNGDCSQCWGRENLGHLC
GWCDNSCRPRNDCQYMNSQCPDPEITKISPQSGPLEGGTLLTVQGRNMGRRAEVVEVSIG
MFPCTIIPDQYTVSVELVCVTGQAVDPTKNFVRITVNQKAMAVSKEAFSYLVPKLLSMEP
RKGSRSGGTRVTIKGEHLDTGSQIRVKVNGTQECTILTLTEDTIECTMPAALHTHTEAVS
VCVEFEYIPCQRSELLTQYIYEKNPSISFIKPRQSYLSGGRTITVTGQGFDLVQSVTMEV
LDIGQAACKVQPPSMITCSSPTSSQSQQATVEFFLNGVLYTGDSPVFYGPGQEEEEEPHG
GHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSNLELAPEEYSVMIGSYPCDIS
FHNDQLFHCSINGSLGSSEGELPVTVQVGNFQRIIAKVQLGASELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNSSQG
IPFLEYKQFVTRTFFPKMCSDYERSLVQPVYENNALGPRALPETHPLLQDWQPSNTAKPN
MEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLAVRVMNTDTICQVKD
KILDAFYKNLPFSQWPQAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIP
EGASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDELFENKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYR
NQVVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggagaagatagttgttctgattttcggcgttctggtgctggaatcgtcc
tggaatgcacaacacagcccatggcttgccagcgcgctacagatccaacaggcgttcgcc
tctccaaaccagaccaataactttgtggtggatgaggtgagtagaaaagtctacctggct
acggtaaacatggtctaccagcttaacaggaccctgagcgcggaggtggagaagagaaca
gggccggtggaggacaacctgctgtgccatgcgccgcagcttccccaagcgccctgtgag
caccccaaatccctcactgacaacttcaacaagctgctcgagctggaccgggagcagggg
gtgctggtggtatgcggctcggtgtaccagggcttctgtgagctcaggaagatggaaaat
atatctcagatagcggtggagtttccccctcagggcgagaagaccgtgttccccagcatg
ctgaatatcgccgcgaaccaccccaacgcttccactgtggggctcatcttcaggagccat
ggggggaacacccgactcctcgtcggggccacttacaccggcgtcgggaccacgtttttc
cccaagaaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgccattcgg
tccctgaacatcaatgatttatctaggctgttcacctatgacatcaacccgtcagaggat
aacgtcttcaagatcaaacaggaggtgaagcagaagaataaactaaactttgtccatgcc
ttcattcagaagacctattcttatattgctatcaacaacgacgcgaatatgggccacaag
gagagccagccgaacagcatcctggccaggatatgcctggacaccgagaaccccagaaaa
tccacctcagagagccgtaaactcactgagtccttcatccagatgccgctccagtgtgga
tataacgggaacatctacaaccgtctcgtctccgttcaccccgcggagatccactcgggg
accagagaggggctggagtcgtacctgttcggggtgttcaccaaatcagacagaaagtct
gccctgtgtgcgtttcggttctcagacatcgaggaagagatccgtcagggccggaggaac
tgctccaactcccccagcagcgaggtgcaggtgctggacagcgtcatccagggctcgggc
gcagcgtgcgtacacaaagggaatctggtgctgcaaccggagcagctggactgtggagcg
gcccacctgcagcacccactggccctacaaaggcccttgagggccacacccctgtttgag
tctctgggcctcagctctgttgccgtggacgacgtacatcaccacaccgtggtgtttctg
ggcaccagcaccggacgactgcgcaagctgaccctcctgaagaacctgaccgtggccaat
cagtgggctctgaagctaccagctggcgaatcagtgcatcacattatgacctttgacccc
atagacaggaactacctctaccttatgacttctcaccatctcctgagggtaaaggtagca
gcatgtagccagtacagaacatgcagtgactgtctgggggccggcgatgcacactgtggc
tggtgcacactggagagcaggtgttccatccagagggagtgtacctgggggcctctggcg
cgctcctggatcgggatgggcgaaggtccccagcagtgcccctccatgaccctcaccccc
ccagagatcagcctgtccactgacatcaaggatgtggggattctgataaacggcagtgtc
cctgatctggttggttcgcgggtggaatgtgactatggattgggtgttgccacggcagcc
acggtgcacctggactatggcccagcccagattcagacctgccccctactacctcgggag
aggtaccccaacatcccccctggcagagatcacttgactgttcccgtggcgataaaggtg
aacggcacatccgtggtttccgggagcttcgtcatctatgattgcgagaggacaggagca
atacacacgaaaactgcatgtatcagctgtctgagcaccaggtggaggtgttactgggac
caggacagccactcttgcctctcctctaaagacgactccaaacatagcctgctagagaat
gctactttctgtccaagtcttgtggcagagaatgttgcaccttcaccctcggggatgacc
cagaacttcaccctgttcctagacaacgtggtacagggggaggagctagagtgtgacttt
gggaacaagcagcggtatgattcccgatggctggaggacagctcaggggtcaagtgcagt
ggagtgacgctaaccactgtggagaagagtcaggtgtttcagctcagtctgcgtagaaag
ggacacctggacaaatacattgacagccctaaacccgtgacagtggaggtgtataactgt
ggggtgggcaatggggactgttctcagtgttggggacgtgagaacctgggacatctgtgt
ggctggtgtgacaacagctgtagacccaggaatgactgccagtatatgaatagccagtgt
cctgaccccgagatcaccaagatctccccccagagtgggccgttggagggaggtaccctg
ctcacggtgcagggtaggaacatggggcgcagggctgaggtagtggaggtctccatcggg
atgttcccatgtacaatcattcctgaccaatacactgtctctgtggagctggtgtgtgtt
actgggcaggccgttgatcccacaaagaattttgtaagaatcactgtgaaccaaaaagca
atggcggtgtccaaagaggccttctcatacttggtccccaagctgttatccatggagcct
agaaagggctctcgttctgggggaaccagggttaccatcaagggggagcacctggacact
ggctcccagatcagagtcaaggtcaatggtacccaggaatgcaccatcctcacgctaact
gaagacaccattgagtgcaccatgcctgcggccctgcacacacacactgaggcagtgtcg
gtgtgtgtggagtttgaatacataccctgtcagcgctctgagctcctcacccagtacatt
tacgagaagaaccccagcatcagcttcatcaaacccagacagagctacctcagtggcggt
cggaccatcacagtgacagggcagggttttgacctggttcagagcgtcactatggaggtg
ctagacatcggacaggcggcctgtaaggtgcagcctccctccatgattacatgctcctcc
cccacctctagccaatctcagcaggccacggtagagttcttcctgaatggagtcctctac
acaggagatagcccggtcttttacggcccaggccaggaggaagaggaggagcctcacgga
ggtcacttcctgttggagtacgtggaggaccctcaattcttcaccgccaacaaggagaag
ctgatcaagcaccaccctggggagccactcacactcatcatcaacaaaggaccgagcaat
ctggaactggcgccggaggaatactcagtaatgattggctcctatccctgtgacatcagc
ttccataacgaccagctgttccactgcagcatcaatggctcgctgggctccagtgaagga
gaactgcctgtcaccgtgcaggtgggtaacttccagaggatcatagccaaggtgcagctg
ggtgctagtgagctggccattgtggtgtccatcgtggtgtgctgcgtcctgctgctgctg
tgcactgtggctctggtggtatactgtactaagagccggagggcggagcgctactggcag
aagactctgctgcagatggaggagatggagtcccagatcagagaggagatccgcaaaggc
tttgcagagctgcagacagatatgacagacctgactaaggagctgaacagtagccaggga
atccccttcctggagtacaaacagtttgtcacacgcactttcttccccaagatgtgttca
gactatgagaggagtctggtccagcccgtctatgagaacaacgccctcggtccacgagcc
ctccctgagacacacccccttctgcaggactggcagccctctaacacagccaagcctaac
atggaagagggcataactctcttctccactcttctcaacaacaagcacttcctggttacc
ttcgtccacgcactggagcaacagaaggactttgccgtacgcgacaggtgcagcctggcg
tccttgctcactatcgccctccatggtaaactggaatactacaccagcattatgaaggat
ctgctggtggacctgattgacgcctcggccgccaagaaccccaagctgatgctgcgacgc
acagagtctgtggtggagaagatgctcaccaactggatgtctatctgcatgtacagctac
ctcaaggagacagtgggcgagcccttcttcctgctactgtgtgccatcaagcagcagatc
aacaagggttctatagacgccatcacagggaaggcccggtacaccctcaacgaggagtgg
ctgctcagagagaacatcgaggccaagccacagaacatcaacgtctcgttccagggctgt
gggatggactctctggccgtgagggtgatgaacacagacaccatctgccaggtgaaggat
aagattctagatgccttctataagaacctgcccttctcgcagtggccccaggcagaggac
gtagacctggaatggtttgcgtctggtagtaacagcaggatcctccaggacctggataac
acttcagtgatggaggatggcaggaagaaactcaacacagtcacgcattaccagatccca
gagggggcgtcattcgccatgagcatgaaagacaagagagacaacaccctggggagagcc
aaagacttggacacagagaaatatgtccatttggtcctgcctcatgatgagctgtttgag
aataagaagtcccacagacagagtcaccgtaagaaggtcctccctgagatctacctgaca
cgcctcctctccaccaagggaacattgcagaagttcctggacgaccttttccaggccatc
ctcagtattcctgcagaacgtcccccactggccatcaaatacttctttgacttcctggag
gagcaggcggacaagaggggcatcaccgaccccgacaccctgcacatctggaagaccaac
agtttacctttgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatt
gacaagacggatcacatggacgcatgtctgtctgtcatcgcccaggccttcatagacgcc
tgctccatttcagacctgcagctgggcaaggactctcccaccaacaagctgctgtatgcc
aaggagatcccagagtacaaaaagagggtgcagtgctactacaagcagatccaggagatg
gcgccactgagcgagcaggagatgaatgcccacttggccgaggagtcacggaaatacaga
aacgagttcaataccaacctggccttgacggagatctacaaatacgccaagaaatacaga
aaccaggtggtgagtgctcttgagtccaaccccacagcgaagcgtactcagctgcaccac
aagtttgagcaggtcattgctctagtggaggacaacatctatgagtgcagcagtgaggcc
tga
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