Oncorhynchus gorbuscha (pink salmon): 124032013
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Entry
124032013 CDS
T07892
Name
(RefSeq) pleckstrin homology domain-containing family M member 2-like isoform X1
KO
K15348
pleckstrin homology domain-containing family M member 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124032013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124032013
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124032013
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
Other Arf associated proteins
124032013
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
124032013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_PLEKHM2
RUN
PH
Myosin_TH1
SBP_bac_10
PH_9
Motif
Other DBs
NCBI-GeneID:
124032013
NCBI-ProteinID:
XP_046199905
LinkDB
All DBs
Position
LG03:80685709..80742586
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AA seq
1042 aa
AA seq
DB search
MDQLKVKNRILENISSSVKKLQSYFAACEDETPAIRNHDRVLQRLCEHLDHALLYGLQDI
SSGYWVLVLHFTRREVVRQVDELQHIATNLGRSRAWLYLALSESSLESYLRLFQENQGLL
QKYYFKNALVCSHDHLTLFLTLVSGLEFIRFDLELDVPYLDVAPYMPEYYKPQNLLDFEE
RLPSSDSLSLLSFTSLTSTNLEWDDSAIAPSSEDYDFGDIFPVLQLTADWEEGDLTNPVI
CPRSSASDPQTVFKDSVILRAAIIPVRGTSPPRSPTRHNPFNEDSDTNTSADITPVHTAS
RHPHDTTTTVDDTESTSNELEVIRMARRRKPAKKRHVVKGSSNSTVSSEQNTAASEQAEV
EDGTQARGGEGLDGDSCSPSVGPPQGSGAETVRRRRGMGDEEGQEEDESEGLLRLPEMTD
TSMDSVGQPLRDVMDRLNGALDGGQAWWRPDREEEDKGEEGEKTHQSSLPRRSSSGSPEA
NSQPPGQEPFQGDPIIKPPDPEAGAPLLLRPALAPSPSFLQAPPAPADFYCFIPHSPDAA
AMRGGHHDTAGHGQPQALPGGHEDEREAEAPPGQDPFLEEAGVVENGLPAGETEEDRLSP
TENSHSAEFKVDNNHLLLLMIHVFRETEEQLFKMVRMSTGHMEGDLQPLYLLLTDCYIYL
LRKGAAEKPYTVEDAISYNELDYVSVGVDQQTVTLVCTNRRRQFLLDTSDSSLTIWFLAA
LKSAMIKGCREPPYPSVLTDATMEKLALTKFVSQESHCEVSEVVIRLYSLVHWEDPMDVT
LAPQTALVGAGDSSSTKEGPLLYRAGTTYLGKELWKSCYLVLSNGNLYQYTEKSDATPLM
SITMGGEHCGGCRRSNSTELPHAFQVILTERPPLVLSADNEGDMSDWMLVLCQSVSKGVI
PQGDPPTPCIPCCLVVTDRELLTCHQDCQTSFFRSLGGAELSDISSVSLEDDKEYCVVEF
ASDRAQFLPPWVLYFSGCEERDRLLEALESVWRDIFQVCLPRRRVSEPLVQKRCGDALAL
MRSAWQRSDSLARGRAQREPWC
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactcaaagtcaagaaccgaatattggaaaacatttcttcgtctgtcaagaag
ttgcagagttactttgctgcctgtgaggatgaaactccagccatccggaatcacgaccgg
gtcctacagcgactgtgtgagcaccttgaccatgctctactctatgggctgcaggatatc
tcctcaggttactgggtactggttctacacttcacccgcagggaagtggtccggcaggta
gacgagctccagcacatagcaaccaaccttgggcgaagtcgtgcctggctatacctagca
ctgagtgagagctcattagaaagctatctccgtctcttccaagagaaccaaggattgctg
cagaagtattacttcaaaaatgcattggtgtgcagccatgatcacctcacactcttcctc
acattggtgtcgggactggagttcattcgctttgatctggagttggatgtcccttacttg
gatgtggcaccctacatgccggagtactacaagccccagaatctgctggactttgaggag
cgccttcccagctctgacagcctttctctgctctccttcacctccctcacctctaccaac
ctggagtgggacgacagcgccatcgccccgtccagcgaagattatgatttcggtgacatc
ttccccgtgttgcagctaactgcagactgggaagagggtgacctcaccaacccggttatc
tgtcctcgctccagcgcctcagaccctcagacggtcttcaaagactctgtgattctccgg
gctgccatcatcccagtgaggggaacttccccgccccgcagccccaccagacacaacccc
ttcaacgaggactcagacaccaacacctcggccgacatcacccccgtccacactgctagc
cgccacccccacgacaccaccaccaccgtggacgacacggagagcaccagcaacgagctg
gaggttatcaggatggccagacggaggaagccagccaagaagcgccatgtcgtgaagggc
tccagcaactccacggtgagcagtgaacagaacacagcggcctccgagcaagcggaagta
gaagacggaactcaggcgagagggggagaggggctggatggagactcctgtagcccctct
gtggggccgccgcagggctcaggggccgagacagtgaggagaaggagagggatgggggat
gaggaaggccaggaggaggatgagtcagagggtctcctgcggctgccggagatgactgac
acctccatggacagtgtgggccagcccctacgtgatgttatggaccggctcaatggagct
ctggacggggggcaggcctggtggcgaccagacagagaggaagaagataagggggaggag
ggggagaagacccatcagagttccctccctagaaggtcctcctctggcagccctgaagcc
aactcccagcccccggggcaggagccctttcagggggatccgattattaagccgcctgac
ccggaagctggggcccccctcctgctgcgccctgctctggccccgagccccagcttcctg
caggcccctccagcccctgcagacttttactgctttatcccccacagtccagatgctgct
gccatgcgtggtggccaccatgacactgcagggcatggccagccgcaggctcttcctggt
ggccatgaagatgagagagaggcagaggcaccaccaggacaggaccctttcttagaggag
gcaggggtggttgagaatggattgcctgctggagaaactgaagaggacaggctcagtcca
acagaaaactcccattctgcagaattcaaggtggacaacaatcatctgctactgctcatg
atccacgtcttcagagagaccgaggagcagctcttcaagatggtgaggatgagcacgggt
cacatggagggagacctgcagcctctctacctgctgctgactgactgttacatctacctg
ctgaggaaaggtgcagcagaaaagccctatacagtggaggacgccatctcttacaatgag
ttggactatgtctctgtgggtgtggaccagcagacggtcacgctggtctgcacaaaccga
agacggcagtttctcctggacacatccgactcctcgttgactatctggttcctggcagcc
ctgaagtcggccatgattaaggggtgcagggagcctccttacccctcggtgctgaccgat
gccaccatggagaaactagccctcactaagtttgtctcccaggagtctcactgtgaggtt
tctgaagtggtcatccgcctgtattctttggtccactgggaggaccccatggatgtgact
ctggccccccagacagccttggtgggtgctggagactcctcaagcactaaagagggcccc
ttactctacagagctggcaccacctacctgggcaaggagctgtggaagagctgttacctc
gtactgagcaatgggaatctgtaccagtatacagaaaagagtgatgcgacaccactgatg
tccatcactatggggggtgagcactgcggaggttgccggcgctccaacagcacagagctg
cctcatgccttccaggtgatcctcacagagcggcctcctctggtgctgagcgctgacaat
gagggagacatgtccgactggatgctggtgctctgccagtcagtctccaaaggggtgatc
ccccagggagatccgcccacgccgtgtatcccctgttgcctggtggtgacggacagggag
ttgctgacatgccaccaggactgccagaccagcttcttccgctcactgggcggagctgag
ctctctgacattagttctgtcagcctggaggatgacaaggagtattgtgttgttgagttt
gcatcggaccgagctcagttcctgcctccctgggtgctgtacttcagtggctgtgaagaa
agagaccgcttgctggaggcactagagagtgtctggagagacattttccaggtgtgtctg
cctcgtaggagggtgtcagagccgttggtgcagaagcgttgtggcgatgccctggctctg
atgaggagcgcctggcagaggagtgacagccttgcccggggacgcgcccagagagagccc
tggtgctga
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