Oncorhynchus gorbuscha (pink salmon): 124032166
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Entry
124032166 CDS
T07892
Name
(RefSeq) rap guanine nucleotide exchange factor 3-like isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04081
Hormone signaling
ogo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124032166
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124032166
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
124032166
NCBI-ProteinID:
XP_046200281
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Position
LG03:complement(88354879..88406694)
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AA seq
910 aa
AA seq
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MPSSSCVITADPLTGKVVLFDWKKNMHLFRSYNYRVFPDRYSVETSSIRGISWTPLPEAL
DTQDTMKQFLSDRILKAARVVYSALIERNPDLIRDRKHHLKSYRQCCSGKDLVDWLMKLN
KCLQSRSQAVGMWQVLVDEGIIVHVKQELNFHDKDTQFYRFLDSEFGLSHLTNEKNALNH
TANENLYLKHTTHEKDQSDEELQEGLSLLLQMGPDALLTMILRKCPSQRSAEDLEVIYEE
LLHVKAAAHLSTSVRKELAAVLVFESHAKAGTVLFSQGDKGTSWYIIWKGSVNVITHGKG
LVTTLHEGEDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFIRILKDVEANTVRLEEH
GKAVLVLEKAESTNQGGTGNISKYTVMSGTPEKILEHLLETVKLDTNGDDAIDPCVSDFL
LTHRVFMPSSQLCPALQQHYHAEPSEGSELEKAAWALNTKQKIVKLIGQWVALFSQMLKD
DPIAVDFLETLRKEVSGDSRLSSMLREQLRDRRRTRVLENGFGSLASFDWFSSCEEPVGK
CLPIRSQDKVLYEIFRPDHTSVMLMLPVNTSVQEVMSSLVNPGGDHVLVKMNSKGDRTQL
KLDTTAVYTSLGLNERLFLCSASQVEQLTPLKEQQGPNQSTMDTWEQMCPKDISSQLTNY
DWELFTAMHEVELVYYIFGRHKFPGATTANLERFVHRFNEVQYWVVTEVCLCTDLVKRAM
LLKKFIKIAVVLKEQKNLNSFFAVMFGLSNSAVQRLYKTWERVPSKTKRVYCAYERLMDP
SRNHRAYRLAVAKLSPPYIPFMPLLLKDMTFIHEGNKNYTDKLVNFEKMRLIAKTVKIVR
GCRSTPYVPSSPQKGLADRMFLEAPSIRLSTYSEESPPLRNPSNIRHYVQNFEVIDNQHK
LTQLSRAMER
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttcgtcatgcgttattaccgcagatccactaaccgggaaagttgttcttttt
gattggaaaaaaaatatgcatctgttccggagttacaattatcgagttttcccggatcgt
tattctgtggaaacatcgagcattcgaggcatcagttggacacccctgccagaggctctt
gacacacaggacaccatgaaacagtttctgtctgatcgtattctgaaagcagcgagagtg
gtgtacagtgccttgatagagcgtaaccctgacctgatcagagacagaaagcatcacctg
aagagctacagacaatgttgttcggggaaagatcttgttgattggctgatgaagctaaac
aaatgcctccaatcaaggagccaggcagttggaatgtggcaagtcctggtggatgaagga
atcattgttcatgtgaagcaagagttaaatttccatgacaaagacactcaattttaccgc
ttcctggattcggagtttggactgagccacttgactaatgagaagaatgcactgaatcac
acggccaatgagaatctctacctgaaacacacaacccatgagaaggaccaatcagacgaa
gagctgcaggagggtttgtcgttattactccagatgggtccagatgctcttctgaccatg
attttacgtaaatgccctagccagcgaagtgctgaggacctggaagtgatctatgaggag
ctgcttcatgtcaaggctgctgctcatctctccacctctgtgcgtaaggagttggcagct
gtgttggtgtttgagtcccatgccaaagcaggcacagtattgttcagtcagggagacaaa
ggtacttcctggtacatcatctggaagggctcagtcaatgtcatcacacatggaaagggc
ctggtaacgacgttacatgagggagaagactttgggcagctggccctggtgaacgatgct
cccagagcagccaccatcatcctgagagaggacaactgccacttcctacgagtcgacaaa
caggacttcatacgcatcctcaaggatgtggaggctaacactgtgcgtctggaggaacat
gggaaagctgtgctggtgctggagaaggctgagtcgaccaatcagggagggactggaaac
atcagcaagtatacggtgatgtctggaacaccagagaagatcctagaacacctgcttgag
acagtgaagttggatactaatggcgatgatgctatagatccctgcgtgagtgacttccta
ctgacccacagggtcttcatgccctccagccagctctgcccagccctacaacagcattac
catgccgagccgtctgagggctcagagctggagaaggcagcctgggccctcaacaccaag
caaaagatagtgaagctgattggccagtgggtggcgctgtttagccagatgctcaaagac
gaccccatcgctgttgacttcctggagacgctgaggaaagaggtgtcaggtgactcccgt
ctgtccagtatgctgagagagcagctcagagacaggaggagaaccagagtgctggaaaat
ggttttgggtcactggcaagttttgactggttctccagttgtgaggagccagtagggaag
tgcctgccaatcagatcacaggacaaagtattgtatgagatatttcggccagaccatacg
tcagtcatgctgatgctgccggtgaacacctctgttcaggaagtgatgtcatcgctggta
aacccaggaggagaccacgtcctggtcaaaatgaattccaagggagacaggactcagctg
aagctggataccacagcagtctacacctccctggggctgaatgagagactgttcctctgc
tctgccagccaggtggaacaactgacacccctgaaggagcagcaaggtcctaatcagagc
accatggacacttgggagcagatgtgtcccaaggacatctccagccagctcaccaactac
gactgggaactgttcaccgccatgcacgaggtggaattagtctactatatatttggccga
cataaattccccggggccaccacagctaacctggagcgtttcgtgcatcgcttcaacgag
gtgcagtactgggtggtgacggaggtgtgtctgtgtactgatctggtcaagagagccatg
ctgctcaagaagttcatcaagatagccgtcgtattgaaggagcagaagaacctaaactcg
ttctttgcggtgatgtttggtctgagtaatagtgctgtacagagactttacaagacctgg
gagagagtgccgagtaagacgaaaagggtctattgtgcatacgagaggttaatggatccg
tcacgtaatcacagagcgtacagactggctgtggcaaagctcagtcctccctacatcccc
ttcatgcccctgctactcaaagacatgacattcatccatgagggaaacaagaactacacg
gacaaactggtcaattttgagaaaatgcgcctgattgctaagacagtgaagatagttcga
gggtgcagaagcacgccttacgtgccctcatcacctcagaagggacttgcagacagaatg
tttctggaggcgccttccattcggctgtccacatattccgaggaatccccccctctcagg
aatcctagcaacatccgccactatgttcagaactttgaagtgatcgacaaccagcacaaa
ctgacacaactgtccagagcaatggagcgctaa
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