Oncorhynchus gorbuscha (pink salmon): 124032290
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Entry
124032290 CDS
T07892
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124032290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124032290
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124032290
Intermediate filaments
Intermediate filament-binding proteins
124032290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
DUF5060
Big_3_5
Big_1
Big_13
CH_2
Motif
Other DBs
NCBI-GeneID:
124032290
NCBI-ProteinID:
XP_046200519
LinkDB
All DBs
Position
LG01:complement(9684695..9734891)
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AA seq
2759 aa
AA seq
DB search
MTSNNTHYYDDSQPPQHYQGTDNFEGDEEDEMPATEKDLAEDAPWKKIQQNTFTRWCNEH
LKCVNKTVTDLQKDFGDGLKLIGLLEVLSQKKMYKKHHTRPNFRQMKLENVSVALEFLDR
EHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEEAKKLTPKQRLLGWI
QNKVPELPINNFHRDWRDGKALGALVDNCAPGLCPDWKAWDPNHPVENAREAMQQADDWL
GVPQVIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKGVQLYPSKAKAYGPGIDS
HGNMVLKPAVFTVETLQAGQAEVLVYVTDPEGHTEEATVVFNNDKNRTYTVTYVPKVEGV
HKVKVLFAGQDIDKSPYTVNVAKAMGDPNKVQARGPGLEATGNVANKPTYFDIYTAGAGN
GDVSVVVVDPEGKKDTVELILENKGDSVFRCTYRPMLEGPHTIHILFAGQEIPKSPFKVQ
IAEAPPSMVGPPPVQIIPQSSFTSPGGGKEPAGKKGGVPTPKGKKGRPTINANACCATGR
GLQPKGVRVKEVADFKVFTKGAGCGELKVSVTGPSGAEAPVKVKDIGDGVYECEYLPVQT
GKYTVNITWGGQLIPRSPFEVEVSEEVGPQKVRAWGPGLLTGQVGKSADFVVEAIGTEVG
TLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAA
NDCFPEKVKAFGPGLAPTGVIVNKPAEFTIDAREAGNGHLKIYAQDTEGVTIDIKITDKG
DGTFLCVYVPTKPIKHTIIITWGDVNVPNSPFRVIVGEGCHPAKVKVYGPGVEKTGLKAN
EPTYFTVDCAEAGQGDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGKYT
IMVLFAEQEIPISPFRIKVDPSHDAGKVRAEGPGLNKTGVEVGTPTHFTIFTKGAGKAKP
EVQFTAAGLKGEAVRDFEIIDNHDYSYTVKYTAVQQGQMTISVTHGGDPIPKSPFNITVA
PPIDLGKVKVTGLDTKVEVGKDQEFSINTKGAGGQGEVAVKMTSPSGRPIPCKLESDAAN
GAHSVKYIPPEEGPYKVDVSYDGNPVPGSPFAVEGVMPADPSKVRAYGPGLKGGIVGKPA
PFAIDTKGAGAGGLGLTVEGPCEAKIECQDNGDGTCSVFYLPTEAGEYAINILFGEQHIP
GSPFKAAVKPCLDPSKVTASGPGLEKAKAGEPAYFTVDCTSAGEAELTIEIVSESGAQAE
VHIQKTADGTFSVTYIPPFHGTHTITIKYGGHVVPKFPAVIQVEPAVDTSGVQVYGPGVE
PRGVLKEVTTHFIVDARKTTKIGGDHVKARIINPSGANTDAYITDKGDGTYRVEYTAFED
GMHLLEVLYDDVAVPKSPFRVSVVEGCDPTRVRAYGPGLEGGLINKANCFTVETRGAGTG
GLGLTIEGASEAKMTCKDNKDGSCSVEYVPFTPGEYDVNINFGGHPIPGSPFRVPVKDVV
DPSKVKCSGPGLGDGVRAHVPQAFTVDATQAGKAKVEVQLTGPSGSAEPVAVKNNGDGTH
TVNYTPAQDGPYTVSVKYGDQEVPRSPFKVRSQPGHDASKVRASGPGLDKSGVAASLPVE
FTIDARDAGEGLLTVQILDPEGKPKKATIHDNRDGTYTVSYVPDSTGPYTITIKYGGDEI
PYSPYRISALPTGDASKCLLTVSIGGRALASGLTKMQAHEETIVSVDAKAAGKGKVTCSV
TTPAGVELDMDVQENRDGTYDIYYTAPEPGKYVITIRFGGQLIPKSPFHVTATKEPVVPS
DGMDQFRPLNLVIPFSAQQGPITGEVRMPSGKTARPHITDNKDGTITVKFNPTEKGLHEM
DIKYEGNHIPGSPLQFYVDAINSGLVTAYGPGLCHGTVNKPATFTVVTKNAGEGGLSLAV
EGPSKAEISCKDNKDGTCTVSYLPTSPGDYNIIVKFDNKHIPGSPFTAKITGDDSIRTSL
LNVGTAADLSLKITESDLSLLTASIRAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHEVS
VKKGGKHVTNSPFKIQVGQSEIGEASRVKAFGKGLVEAHTFEMAEFFVDTRNAGYGGLGL
SIEGPSKVDINCEDVEDGTCRVSYCPTEPGNYIINIKFSDKHIPGSPFTVKVTGEGRMKE
SITRKRTAPSIASVGSACGLNLKIPGNWFQMVSAQERMTRTFTRSSHTYTRTERTEISKM
RGGETKREVRVEESTQMGGAGGGSPFRDVFGDFLGRDSLASFAGIPATATPTPGETVTQG
SMTAQVTSPGGKTEQAEIVDGGDSTYSVRFVPQEMGAHTVNVKYSGQHVPGSPFQFTVGP
MGEGGSHKVRAGGTGLERGVAGVPTEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGS
CGVAYIVQEPGDYEVSIKFNNEHIPDSPFIVPIATLSDEARRLTVTSLQEKDLKVNQEAS
FAVQRNGARGVVDAKVHTPSGSAEECYVTELDSDKNAIRFIPRENGVHSIDVKFNGSHIP
GSPFNVRVGEAGQAGDPGMVTAYGPGLEGGSTGVASEFVVNTCNAGSGALSVTIDGPSKV
KMDCSECPDGYKVIYTPMAPGSYLINIKYGGPNHIVGSPFKARVTGTRLSGGHSLHETSS
VLVETVTKTSKVAGAYSSLSSSSKLTSDASKVVCRGAGLSKALVGQKNIFNVDCSKAGSN
MLLVGVHGPTTPCEEVYVKHMGNRLYNVTYTVKDKGNYIVIVKWGDDSVPGSPFNVAVP
NT seq
8280 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaataacacacattactacgacgacagccagccaccgcagcactaccaggga
actgacaacttcgagggggacgaggaagacgagatgccggctacggagaaagaccttgcc
gaggatgcaccatggaagaaaatccaacagaacacatttacaagatggtgcaacgagcat
ctcaagtgtgtcaacaagaccgtgacagacctccagaaggattttggcgacgggttaaag
ctcattgggctcctggaggttctgagccagaaaaagatgtacaaaaaacaccacaccaga
cccaacttccgacagatgaaattggaaaatgtgtccgtcgctctggaatttttggacagg
gaacacatcaagctggtgtctattgactccaaggccatcgtggacggtaatctaaaactg
atcctaggtctgatctggactctgatcctgcactactccatctccatgcccatgtgggag
gatgaggatgatgaggaggctaagaaactgacccccaagcagaggctgctgggatggatc
cagaacaaggtgcctgagctacccatcaacaacttccaccgtgactggagggacggcaag
gccctgggagccctggtagacaactgtgcccctggtctgtgccccgactggaaggcctgg
gaccctaaccaccctgtggagaatgccagagaggccatgcagcaggctgacgactggctg
ggcgtgccccaggtgatcgcccctgaggagattgtcgatccggatgtggatgaacactca
gtgatgacctacctgtcccagttccccaaggctaagctgaagcctggcgctcccctcaaa
cctaaaggcgttcagctgtaccccagcaaggccaaggcctacggacctggtattgattcc
cacggaaacatggttctgaagccagcagtgttcacagtggagactctgcaggcaggtcag
gccgaggtgctggtctatgtgaccgatcccgagggacacactgaggaggctacggtggtc
ttcaacaatgacaaaaacaggacctacacggtcacttatgtacccaaggttgagggtgtc
cataaggtaaaagtgctgtttgcagggcaggacattgacaagagtccctacacagtgaac
gttgccaaggccatgggcgatcccaacaaggtccaggccagaggaccagggctggaagct
accggcaacgtggccaacaaacccacctatttcgacatctacaccgcaggtgctggtaat
ggtgatgtgagcgttgtcgtcgtggaccctgaggggaagaaagacacagtggaactgatt
ttggaaaacaaaggggacagtgttttccgttgcacctaccggcccatgttggagggcccc
cataccatccacatcctgttcgcgggtcaggagattcccaagagtcccttcaaagttcaa
atcgcagaggctcctccctctatggtgggtcctcctccagtccagattatcccccagtct
tccttcacctctcccgggggggggaaggagccagcgggcaagaaagggggtgtccctacc
cccaaaggcaaaaagggtcgaccaaccatcaatgccaacgcgtgttgtgccacgggccga
ggcctccagcctaagggggtgagggtgaaggaggtggcagacttcaaggtcttcaccaag
ggagccggctgcggagagctcaaagtctccgtgactggaccaagtggagcagaggcacca
gtgaaagttaaggatattggtgatggtgtctatgagtgtgaatatctccctgtccagact
ggtaaatacacagttaacatcacctggggaggacaactcatcccacgcagtcccttcgag
gtggaggtgagtgaggaggttggccctcagaaggtgagagcttggggccccgggctgctg
accggccaggtgggcaaatcagctgacttcgtggtcgaggccatcggcaccgaagtagga
actctgggtttctccatcgagggtccgtcccaggctaagatagaatgtgacgataagggt
gacggctcctgcgatgtccgctattggcccactgagccaggtgactacgccgtccatgtc
atctgtgatgacgaagacatcaaggacagccccttcatggcccatatcctgcctgcagcc
aatgactgcttccctgagaaggtgaaagctttcggtccaggtctggcgcccactggggtt
attgtaaacaaaccggcagagttcaccatcgatgcccgcgaggctggcaacggccacctc
aagatctacgcccaggatacagagggtgtcaccatcgacattaagatcactgacaaggga
gacggcaccttcctgtgtgtgtacgtccccaccaagcccatcaaacacaccatcatcatc
acctggggagacgtcaacgtgcccaacagtcccttcagggtgattgttggagagggctgc
cacccagccaaggtcaaggtgtatggtccaggagtggagaagacgggactcaaggccaac
gaacccacctacttcactgtggactgtgccgaggctggacaaggagacattagcattggg
atcaagtgtgctccaggagtggtgggcccagccgaggctgacatcgactttgacatcatc
aagaacgacaatgacaccttcactgtcaagtacactccgcccggcgcagggaaatacacc
atcatggtgctgttcgccgagcaggaaatccccatcagtccattcagaattaaggttgat
ccttcccatgatgctggcaaagtgagggctgagggcccaggactcaacaagacaggcgtg
gaggtgggtactccgacccacttcaccatctttaccaagggagcaggcaaggccaagcct
gaggtccagttcacagcagcaggcctgaagggggaagctgtgagggactttgagatcatc
gacaaccatgactactcctacaccgtcaagtacacggccgttcaacagggtcagatgacc
atctccgtcacccacggaggggaccccattcccaagagccccttcaatattactgtggct
cctcctatagatctgggaaaggtcaaggtgacaggactcgacaccaaagtagaggtgggc
aaggaccaggagttctccatcaacaccaagggagctggtgggcagggcgaggtagccgtc
aagatgacctcaccctccggccgaccaatcccctgcaagctggagtcagacgcggccaat
ggcgcccactctgtgaagtatatccccccagaggaggggccttacaaggtggacgtcagc
tacgatgggaaccctgtccctggatcccccttcgcagtggagggagtgatgccagccgac
ccttcaaaggtgcgcgcttatggcccaggcctgaagggaggcattgtgggtaaaccagct
ccattcgccatcgacaccaaaggagcgggcgccggtgggctgggcctgacggtggaaggg
ccgtgcgaggctaagattgagtgccaggacaacggagatggaacctgctcagttttctac
ttgcccactgaggctggagagtacgccatcaacattctgtttggagagcagcacatccct
gggtctcccttcaaggcagctgtgaagccatgtctcgaccccagcaaggtaacagccagt
gggcccggcctggagaaggccaaggcaggggaaccagcctacttcacagtggactgcacc
agcgctggagaggctgaactcaccattgagatcgtctctgagtccggggctcaggccgag
gtccacatccagaagactgcagatgggaccttctctgtcacctacatcccacccttccac
ggaacacacaccattaccatcaagtacgggggtcatgttgtacccaagttccccgcggtc
atccaggtggagccggctgtggacaccagcggtgtgcaggtctatggaccaggggtggag
cccagaggagtcctcaaggaggtcaccacccacttcatcgtggacgcccgtaaaacgacc
aagattggcggtgaccacgtgaaagcacgcatcatcaacccttcaggcgccaacacagac
gcctacatcacagacaagggagacggaacctacagagtggagtataccgccttcgaggac
ggtatgcacctgctggaggtgttgtacgatgacgtggcggtccctaagagtccgttcagg
gtgtctgtggtggagggctgtgaccccacccgggtcagggcctacgggccgggcctggag
ggaggacttatcaacaaagccaactgcttcaccgtcgagaccaggggtgctggtactgga
ggcctgggcctgaccattgagggagcctccgaggctaagatgacctgtaaagacaacaaa
gatggcagctgcagcgtggagtacgtacccttcacacctggagagtacgacgtcaacatc
aacttcggaggacaccccattccaggcagtccgttccgggtgccagtgaaggatgtggtg
gaccctagtaaggtgaagtgttcaggtccagggctgggggatggagtcagagcccacgta
cctcaggcctttacagtggacgctacccaggctggaaaggcaaaggtggaagtacagcta
acaggaccatcaggttctgctgagcctgttgctgtgaagaacaacggtgatggtacacat
acggtcaactacaccccagctcaggacggcccttacactgtgtctgtcaaatacggagat
caggaggtcccgcgcagtccattcaaggtgaggtcccagcctggtcatgatgccagtaag
gtgcgtgccagtggtccaggtctggataaatcaggtgtggccgccagcctaccagtggag
ttcaccatcgatgcccgcgacgcaggagagggactgctcactgtacagatactggatccc
gagggcaagccaaagaaggccactatccatgacaacagagatgggacatacacagtgtcc
tacgtaccagactccaccggcccctacaccatcaccatcaagtatggaggagatgagatc
ccctactccccctaccgcatctcagctctgcccactggagacgccagcaagtgtctgctt
actgtgtctatcggaggccgtgccctggcgtcgggtctgaccaagatgcaggcgcacgaa
gagaccatcgtctccgtcgacgcaaaggctgcagggaagggcaaggtgacctgttcggtg
acgaccccagcgggggtggagctagacatggacgttcaggagaatcgtgacggaacctac
gacatctactacacggctccggaacctgggaaatacgtcatcaccatccggttcggagga
caactcatccccaagagccccttccatgtaacggccaccaaggagcctgttgtccctagc
gatggtatggatcagttcagacctcttaacttggtcatcccgttctccgctcagcaggga
ccgatcacaggtgaggtgcgtatgccctccggtaagacggcccgtccccatatcacagac
aacaaggatgggaccatcacagtcaagttcaaccctactgagaagggtctgcatgagatg
gacatcaagtatgaaggaaaccacatcccaggaagtcccctccagttctatgtcgatgct
ataaacagtggtctggtgacagcgtatgggcctgggttgtgtcatggcaccgtcaacaaa
cccgccacctttaccgtcgtcaccaagaacgctggagaaggtggtctgtccctggctgtg
gaaggtccctctaaggcagagatcagctgtaaagacaataaggacggtacctgtactgtg
tcctacctgcccacctcaccaggagactacaacatcatcgtcaagtttgacaacaagcac
atccccggcagtcccttcactgccaagatcacaggtgatgactctatcaggacgtccctg
ctcaacgtgggaacagcagcagatctatccctgaagatcacagagtctgacctgagcctg
ctgacagcgagcatcagagctccatcaggaaacgaggagccctgtctgctcaagagactg
cccaacagacacatcggaatctcctttacccctaaggaggtgggagagcacgaggtgagc
gtgaagaagggtggtaagcacgtgaccaacagccctttcaagatccaggttggccagtca
gagattggcgaggccagccgggtcaaggccttcggtaaaggactggtggaggcacacacc
tttgaaatggctgagttcttcgtggacactaggaatgcaggttatggtggtctgggattg
tctatcgagggcccgagtaaagtggacataaactgtgaggatgtggaggatgggacttgc
agagtcagttactgccccacagagccaggcaactacattatcaacatcaagttctctgat
aagcacatccctggaagtcctttcacggtgaaggtaacaggagaaggaagaatgaaggag
agcatcaccaggaagagaacagccccctccatcgcctctgtcggcagcgcctgtggcctc
aacctgaaaatccctggaaactggttccagatggtgtcagcccaggagaggatgactcgt
acattcacacgcagcagccacacgtacacgcgcacagagcgcacggagatcagcaagatg
aggggcggagagacgaagagggaggtgagggtagaggagagcacccagatgggaggagca
ggaggaggcagtcccttcagagatgtgtttggagacttcctgggcagagacagtctggct
agcttcgctggtatacccgctacagccacaccaacacctggtgagacagttacccagggt
agtatgacagcccaggtgaccagccccgggggtaaaacagaacaggcagagatcgtagat
ggaggggatagcacctacagcgtccgcttcgtaccccaggagatgggggcccacacggtc
aacgtgaagtacagcggtcagcatgtccctggaagtcccttccagttcactgttgggccc
atgggagaaggagggtcccacaaggtccgggccggaggcactgggctggagagaggagtg
gcaggagtaccaactgagttcagtatctggacgcgtgaggctggtgcaggaggcctgtcc
atcgctgtagaggggcccagtaaggctgagatctcatttgaagacaggaaggatggatcc
tgtggggtggcctacatcgttcaggagccaggtgactatgaagtgtctatcaagttcaac
aacgagcacatccccgacagccccttcatcgttcccatagcaacgctgtctgacgaggca
cgcagactcactgtcaccagcctgcaggagaaggatctgaaggtgaatcaggaagcgtcg
ttcgctgtgcagcgtaacggggcgaggggcgtggtcgatgctaaggtccacaccccatct
ggctcagctgaggagtgttacgtcaccgaactggacagtgacaagaacgcgatccgcttc
attccacgtgagaacggcgtgcactccattgatgtcaagttcaacggcagtcacatcccc
ggtagcccgttcaacgtgcgggttggggaggcaggacaggctggagacccaggcatggtg
acagcatacgggcctggcctggagggaggatctacaggcgtggcctctgagttcgtagtg
aacacgtgtaacgcggggtcaggtgccctgtctgtgaccattgacggcccctccaaggtc
aagatggactgttctgagtgccccgatggctacaaggttatctacactcctatggccccc
ggcagctatctcatcaacatcaaatacggaggacccaaccacatagtgggcagccccttc
aaagccagagtcacgggtacccgtctgtccggtggtcacagccttcacgagacgtcctcg
gtgctggtagagacggtcaccaagacttccaaggttgccggagcgtacagctccttatcg
tcctcatccaaactgacctcagatgccagcaaggtggtgtgtcgaggcgcagggctctct
aaggctctggtgggacagaagaacatcttcaatgtagactgcagcaaagcaggctctaac
atgttgctggtgggagtgcacggccccacgaccccatgtgaagaggtgtacgtcaaacac
atgggcaaccgcctctacaacgtcacctacactgtcaaagacaagggaaactacatcgtt
atcgtcaagtggggcgacgatagtgtccccggcagccccttcaacgttgctgtgccttga
DBGET
integrated database retrieval system