Oncorhynchus gorbuscha (pink salmon): 124033574
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Entry
124033574 CDS
T07892
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124033574
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124033574
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
124033574
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M10
124033574
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
124033574
NCBI-ProteinID:
XP_046201586
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All DBs
Position
LG04:complement(5342763..5378065)
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AA seq
659 aa
AA seq
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MGCQTAFSPRHLVLKVFLVQLIAFLQQTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTTSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGAGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDQFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccagacggcatttagcccccgacaccttgtcctcaaagtgtttttggtacag
ttaatcgcctttctccagcaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgctgaaagacaccctgaagaagatgcagaag
ttcttctctctgcaagagacgggcgagatcgaccccaagacagtggagatcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccacaggaaacccaagtgg
caacaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtctggagtgacgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtcttctggctcatgccttcgctcctggacca
ggcaccggaggagactcccactttgatgacgacgagcagtggaccctgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcacgttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcaccacctctggacgtagcgacggtaagatgtggtgcgcctccaccaag
agctacgacgacgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccacgccctgggcttggaacactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtccaacgacgacatcaag
ggaatccaggagctctatggtgctggtacagacaagcccgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggaccggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctcccagtcaccatcgacgct
gcctatgagaacccattggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctcctttggaaagagccagaagacctacctg
ttcgctggagaccagttctggaggtacaatgaagccaagaaaaagatggaccctggcttc
cccaagctcatcgctgactcctggaacggaatcccagacggcattgactctgcctttagt
ctgaatggcatcgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagatcacaaaggactggctgggttgtcactaa
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