Oncorhynchus gorbuscha (pink salmon): 124033933
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Entry
124033933 CDS
T07892
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03320
PPAR signaling pathway
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124033933 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124033933 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124033933 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124033933 (nr1h3)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124033933 (nr1h3)
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
124033933 (nr1h3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
124033933
NCBI-ProteinID:
XP_046202375
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All DBs
Position
LG04:complement(27924301..27949943)
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AA seq
467 aa
AA seq
DB search
MTTLSATDITDVGHGEVFDGDPELQLDCLCSGDDRSSAEMKHEGNLLPLEPPDHAGFSSS
PQKRPSSLAEESSPLPMEPSDIKADPAGSMLANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHELVERLQQPYVDALRSYIMIKRPND
HLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactgtctgcgactgatatcacagatgttggtcatggtgaggtgtttgacggg
gacccagagctgcagctggactgcctctgcagtggtgacgaccgcagcagtgcagaaatg
aagcatgagggcaacctcctccccctggaaccacctgaccatgcagggttttccagctcc
ccccagaaaaggccttcctcactagctgaggagagcagcccattgcccatggagcccagt
gacatcaaggccgaccccgccggcagcatgcttgccaacacagagggccagccagtgaag
aggaagaagggtccagcccccaagatgctgggaaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaatgtgctgagctgtgagggctgcaagggcttcttccgc
cgcagcgtcatcaagagcgcccagtattcgtgcaagaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgtgaagcaggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaaaaagatgaagaagaatgag
gaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccagaggtggttccg
ctggcgcccgagcagttggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggaccctcag
aacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagaggac
cagattgccctgctgaagacctcaaccattgagatcatgctgctggagacatcgcggaga
tacaaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggaggat
tttgccaaagcagggctgcagttggagtttatcaaccccatatttgaattttccaagggc
atgaacgacctgcacctggacgaggcggagtatgctttgctcatcgccattaacatcttc
tctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactggtggagcga
ctgcagcagccgtatgtggacgcacttcgttcttacatcatgataaagagaccaaacgat
cacctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctcagcagcgtc
cactctgagcaggtcttcgccctgcgactccaggacaagaagctcccgccgctgctgtct
gaaatctgggacgtccacgagtga
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