KEGG   Oncorhynchus gorbuscha (pink salmon): 124034124
Entry
124034124         CDS       T07892                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124034124 (ercc6l2)
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    124034124 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 124034124
NCBI-ProteinID: XP_046202834
LinkDB
Position
LG04:44177418..44196747
AA seq 1581 aa
MMASTSTADIKVWHEGDRCLAPSLREGTLLREGTIQKLPSTSHGEDMALVKFTDQHDEDE
EEEAVFPVCKLQRPDTNQSSTSVVSAQEKPLFLCSQTPPGPSEPLVLSQSGVAVPYTINR
YLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIENNRPQ
FLLTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKEKELARIRRGR
SEIALTTYETLRLYLEQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCLVRVGLTGTI
LQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTKRALATGRRAVRALAAK
LSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYEAVLDTEDVTLLLRSSEKCDCHS
GHSRRKCCYKVNARGVRVTDLYFSYLAILRKVANHAALLQAKWNTSKKQEQYVNEICEKV
FQKFPDFTEKCKQAAFEAMSDPMYSGKMKVLQRLLKHYMQRKDKVLLFSLSTKLLDVLES
YCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFD
PTWNPANDLQAIDRAYRIGQCRDVTVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESAR
RYFDAVQGSDDQKGELFGIQNLFRLQTQGTCLTRRILEREGRVEVGVMTSSTHTGEEEER
KSESEAGEVSARDHCELGNGGAIGSVGASRIPRATTRGVLDFSSGSEEEGEQGDRSKVEK
ANTTLPGRLSLLQHGFSRLLQRSGVRAGSGSESGEHSQSEGGRSDFEEDSDEDTSAMAPK
GLSTAWSGGPQTPTLAPKCGNHLDAAPLKNDWDVSSGSEREEERNGGRWDGQRGRDHDPV
TLSGESDDMGRKILNLKQGIRRKRRVEEDSDDDSPPSSGSKRSNTKTPVSRMHQVMFDSE
SEDIDIEELIRPCAQTHVLKRPPAHLRRREMGRDGGSKRKTSNRPVDQSRRTRQAEDIET
FTSSDENHTAVERVRSVTAPQNHNHGRGPQTDQYGARAFTNPKVNQTVPSAKGPPCGTID
NVLGGVREVVYTHSNQHVVGGSKAEERISRAALRDVFERRRFSQLPANELRDTQKTQPEH
TPPSHTSHNNDVGWVGAVHRSSVDHPVTHTIRSVHHPTQHTTVIIGETPGTIRRQQLEEM
ACVFGSGSLRQFAEEVLRSTSAQRLAQLRQYYTDQGPEVASTIRENFAEPHTAQPKVNRI
TPSSSTTKHRPNSKRNQRVALEPQAEPRTRHRSVPEPQRDVPSSEEQMVRNARGGKKKSG
NSGMSRAAQCSSSDLDNSRSSPLGPGAYRAQPVSSSSSSSSALSHPQAKPTASPQRGRSS
MLSSPRKSEVVGRQRYRAQPSSPPSQQVLLTELLGDTSILDDLLRPRSKASSEPQRAFPK
TPTSQAVFTPTSHSATPASCHPTTPPKPPSTPHPRPLTKSVPGPSSTTTTTPPSRSNTTP
LTHPITPLFSPALERSKNSHRDFWDILEEGNEERINKLTDPSEVERVCESASVRARGGTG
GGEEKGNTSLWKRNDKFLWKK
NT seq 4746 nt   +upstreamnt  +downstreamnt
atgatggcttcaacttccacagctgacataaaagtgtggcatgagggcgacagatgcctc
gctcccagcctcagagaaggcaccctactacgagaggggacaatccagaaactcccttcc
acttctcatggtgaggacatggcactggtgaagttcacagatcaacatgatgaagatgaa
gaagaggaggcagtctttccagtctgtaaactccagagaccagacacaaaccagtcgtcc
accagtgtagtgtctgcccaggagaagcctctattcctctgcagccagacacctcccggg
ccatcagagcccttggtgttgtcacagagtggtgtggcagtcccatacaccatcaacagg
tacctgaggtactaccagaaggaagggatccagttcatctatgacaactatgcccagtcc
agaggatgtatcctgggagatgacatgggtctgggcaagaccattcaggtcattggtttc
ctggctgctgtgctgggtaaaacagggacatgggaagacattgagaacaacaggcctcag
tttcttcttactcagatccccacacagcgaagcaaaccccgaaaggtgttcttgattgtg
gcccctctgtcggtgctgtacaactggaaagaggagctggagacgtggggtcacttcctg
actgttgtagtccacggtctgaggaaagagaaggagctggctcgcatccggaggggacgc
tctgagatcgccctcaccacctacgagaccctacgtctctatctggagcagtttaacagc
attgactggtctgctgtgatagtggacgaggcccacaagatcaagaaccccaactcccag
atcactggggcaatgaaggatctgaggtgtctggtcagagtgggcctcactggcacaatc
ctgcagaacaacctggatgagctctggtgtgtcatggactgggccatccctcgttgcctt
ggcagcctgggtaacttcaagaatatgttttcggaccccatcgaactggggcagaagcac
agtgtaactaagcgggccctagcgacgggcaggagggcggtccgggccctggctgcgaag
ctctcccattggtttctccggaggaccaaggctcttatcagagagcagctgcccaaaaaa
gacgacagggtggtgtactgttcgctgacgtcgttccagcagactgtgtacgaggcggta
ctggacacggaggacgtcaccctgctcttgcgctcctcagagaagtgtgactgtcacagt
ggacactcccgcaggaagtgctgctacaaggtgaatgctcggggtgtgcgtgtgacagac
ctgtacttcagttacttggccattctcaggaaggtggccaaccacgcggctttactgcaa
gccaagtggaacaccagcaaaaagcaggagcagtatgtgaatgagatctgtgagaaggtg
ttccagaagtttcctgacttcacagagaaatgcaagcaggcagcatttgaggccatgtca
gaccccatgtacagcggaaagatgaaggttctccagaggttgttgaaacattacatgcag
agaaaagacaaagtgctattattctccctctccactaagctgctggacgtgctggagagc
tactgcatggcagatgggctggagtatagcagattggatggcaacaccaagcccagagag
aggctgaagatcgtcaaagagttcaacagctgccctgacatcaacctctgcctggtctcc
accatggcagggggtctgggcctgaactttgtcggggccaacattgtggtcctgtttgat
cccacctggaaccctgccaatgacctgcaggcaattgacagggcgtatcgtataggccag
tgcagggacgtgacagtgttcagactcatctctctgggaacagtggaggaggtcatctac
ctgcgccaggtctacaaacagcagttgcagtcttctgtgatgggtaaggagagtgcccgg
cggtactttgatgcagtgcaggggtccgacgaccagaagggggagctgtttgggatacag
aacctcttcaggctgcagacccaggggacctgcctcaccaggagaatactggagcgggag
ggacgagtggaggtaggagtaatgacgtccagcacccacacaggggaagaggaggagagg
aagagcgagagcgaggctggggaggtttccgcaagggaccactgtgaactgggcaatgga
ggggcgatcggcagtgtaggggcctcgaggatccccagggcaacaaccaggggggtactg
gacttcagcagtggcagtgaggaggagggggaacagggggacaggagtaaggtggagaag
gcgaacactacccttcctggccgactcagtctccttcagcatggcttctccaggttgctc
cagaggtcaggggtcagggctggatcagggtcagaatcaggggagcatagccagagtgag
gggggaagaagtgattttgaggaggacagtgatgaagacacttctgccatggcaccaaag
ggcctcagcaccgcatggagtgggggcccccagacccctacattggcccccaagtgtggg
aaccacttggatgcagctcctctgaagaacgactgggacgtctccagtggctctgagaga
gaggaagaaaggaatggagggagatgggatggacagagggggcgagaccatgatcctgtt
acactgtcaggagagagtgatgacatggggagaaaaatactaaatctgaaacaaggaata
aggaggaagaggagggtggaggaggacagtgatgatgattcacccccctccagtggaagc
aaacgatctaacactaaaactccagtttccagaatgcaccaggtgatgtttgactctgag
tctgaggacatagacattgaggagctaatcagaccttgtgcacaaactcatgtgcttaag
agacccccagcacacctgagaaggagggagatggggagagatggtggtagtaagagaaag
accagcaacagaccagtagaccagagtagaagaaccagacaagcagaggacattgagact
tttacctcctcagacgaaaaccacactgcagtcgaaagagtccgatctgttacagcccca
cagaaccacaatcatggcagaggcccacagacagaccaatacggagcgagggcgtttaca
aacccaaaagtgaaccagactgtcccttctgccaaaggaccgccctgtggaacgattgac
aatgtgttaggtggtgtacgtgaggtggtttacacccactctaaccaacatgtggtgggc
gggagcaaggccgaggagcgaatcagcagagccgctctcagagacgtgtttgagcgcagg
aggttctcccagcttccagccaatgaactccgggacacacagaagacccagcctgaacac
actccaccatcccatacttcccataataatgatgttggttgggtgggagcagtgcacaga
tccagtgtggaccacccagtcacacacaccatcaggagcgtccaccaccccacccaacac
accaccgtcattatcggagagacccctggaaccatccgaaggcagcagctggaggagatg
gcgtgtgtatttggatctggttcattgagacagtttgctgaggaggttctgaggagtacc
tctgcccagagactggctcagctacgacagtactacactgaccaaggccctgaggtggct
tccaccatcagggagaacttcgcagaaccacacacagcccagcccaaagttaacaggata
accccttcctcctctacaaccaaacatagacccaactccaaaaggaaccagagagttgct
ctagaaccccaagcagaacctagaacccgacataggtccgttccagaaccccagagggat
gttccctcttctgaggagcagatggtccggaacgccagaggagggaaaaagaagagtggt
aatagtggaatgtccagagctgctcagtgctccagctcagacctggacaatagtaggagt
agtcctctgggaccaggggcctatagagctcaacccgtttcttcctcctcctcttcttct
tcagctctcagccatccccaggctaagcccacagccagccctcagagagggaggagcagc
atgctgtcctcccccaggaagagtgaggttgtggggaggcagcggtacagagctcagcct
tcctctccccccagccagcaggtcctcctcacagagctgctaggagacacctctatcctg
gacgacctgctgcgacccagaagcaaggcctcctcagagcctcagagggccttccccaaa
acccctacctcacaggctgtctttacacccacttctcactctgccacacctgcctcctgt
caccctacaacgcctcccaaaccgcccagcacaccccaccctcggcccctgacaaaatcc
gtcccaggtccttcttctactactactactactcccccctctcgatccaacaccacaccc
ctcacacaccccattacaccacttttctctccagcccttgagaggtcaaagaacagccac
agagacttctgggacattttggaggagggtaacgaggagaggatcaacaaactgacggac
ccgtcggaggtagagagggtgtgtgagagtgctagcgtcagggccagaggaggaacaggg
ggaggagaggagaaagggaacacgtcactttggaagaggaacgacaagttcctgtggaag
aagtga

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