Oncorhynchus gorbuscha (pink salmon): 124037006
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Entry
124037006 CDS
T07892
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124037006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124037006
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
124037006
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124037006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
124037006
NCBI-ProteinID:
XP_046207580
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All DBs
Position
LG06:11436761..11446205
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AA seq
436 aa
AA seq
DB search
MEEKQYTSLTVPTDYLQQWYQSTQQHPQAQHVMQYHNTGHMGHYMEGSREDRVMTELSVH
QELPVHQELDFHHDFHQEPIVQHDQPVDTSQAPTPGKRKRGRPPKQKPGEGQPQEDYDQA
EALKKAKRTLNRFNGMSVDEVMAKTLPDIIDHNLDILIIGINPGLLSAYKGRHYPNPGNH
FWKCLFLSGLTDEQLNHMHDLSLPEKYGIGFTNMVERTTPGSKDLSSKEFREGGRQLVEK
LKKYKPLIAAFNGKCIYEIFSKEIFGVKAKKLEFGLQPYKIPETETVCYLMPSSSPRCAQ
FPRAQDKVHFYIKLKELRDKIKGVVSVVREVQETEYHFDLGLAKEDAKRMAIKEEQVDPA
YETCDGEREEARQSTSYCNISSTKETAMPSKDQAQATPLNHMPYDQWMTQSFADQIPDIS
CNSSNVAQPQLGAETF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtatacgtcactgacggttcctacggattatctccaacagtggtac
cagtccacccagcagcacccccaagctcaacatgtgatgcagtaccataacacgggccat
atgggtcattacatggagggatccagagaggaccgggtcatgacggagctgtctgtccac
caggagctccctgtccaccaagagctggacttccatcacgacttccatcaagagccaatc
gtccaacacgatcagcctgtggatacatcacaagctccaacaccagggaagagaaagaga
ggtcggcctcccaaacagaagccgggggagggccaaccgcaggaggactacgatcaggca
gaggccctgaagaaagccaaaaggacccttaaccgtttcaatggcatgtcagtggatgag
gttatggccaaaaccctgccagatattattgaccataacctggacattttgataattggt
atcaatccaggactgttgtcagcctacaagggacgacattacccaaacccaggaaaccat
ttttggaaatgcctgttcctctctggtcttactgatgagcagctcaaccacatgcacgat
ctgagcctgccggagaagtatggcattggctttaccaacatggtggagaggacaacgcca
ggaagcaaagacctctcaagcaaagagtttcgtgaaggaggccggcaattggtggagaag
ctgaagaaatacaagccactaatcgcagctttcaacggaaaatgtatttacgaaattttc
agcaaagagatctttggagtgaaggcaaagaaactcgagtttggcttacagccgtacaaa
atcccagaaaccgaaacagtgtgctacttgatgccttcgtcaagtccccgctgtgcccag
ttcccccgcgctcaggacaaggttcacttctacatcaagctgaaggagctacgggacaag
atcaaaggtgtggtttcagtggtccgcgaggtgcaagagactgagtaccacttcgacttg
ggacttgccaaagaggatgctaagaggatggccatcaaggaggagcaggtggatcctgcg
tacgagacctgcgacggggagcgcgaggaggcaaggcaaagcacaagctactgcaacatt
tcctccaccaaagagaccgcaatgcccagtaaggaccaagcccaagctacaccattgaac
cacatgccatacgaccagtggatgacacagtcgtttgcagaccagataccggacattagc
tgtaacagtagcaatgtagctcaacctcagttgggagcagaaaccttttga
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