Oncorhynchus gorbuscha (pink salmon): 124039556
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Entry
124039556 CDS
T07892
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
ogo04510
Focal adhesion
ogo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124039556
04020 Calcium signaling pathway
124039556
09133 Signaling molecules and interaction
04518 Integrin signaling
124039556
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124039556
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124039556
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124039556
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
124039556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
V-set
VEGFR-2_TMD
Ig_PDGFR_d4
Ig_4
C1-set
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
124039556
NCBI-ProteinID:
XP_046211610
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All DBs
Position
LG07:complement(16717148..16818018)
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AA seq
1286 aa
AA seq
DB search
MIGYIFVVLCGLAGSALAKGKVESVPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWAFPGGVARDQERMRLEDSRCGRQSQHYCSQLTLSSAQAQHTGSFRCRYSHRTLRQRGV
YVYITDRQRPFVEEQNNSPDVVYMKESQPLVFPCRVTNPDATVSLVKFPDQELTPDQRNI
VWNSRQGFLIHSPTYFYIGLFSCKTSVNGTTHSLNYLTHRQVNKIMKVYLNSTSPVQSLQ
GESLAINCTVTAEWNSRVSISWDYPGQANRSAIVSRWIMASKFHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPFIRLKPRQGAEVEAHAGQKSYRLSPKLRAFPAP
EVIWLKDGKVAAEECSRYHVDGNSLVIRDVVEEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPHIAWLWHPCPPKGLCVCPPSSSMW
SPVKERAPGTSTHNHILSVTHRREVLQGKNKTVGVLMVAEAFVSGVYRCIASSSVGKDEL
DMPFYITDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAEATPPTPSLG
GELSSGEATPPTPSLGGELSSGEFSDTLSLLLSNLTAGDSGTYRCSANHLLTGQNTHLDT
QVDVTVLEAPVLLQNLSDCSVNISSSVTLSCRAHGVPRPFITWYKDQHTLLQGSGIVIAQ
GGENLHIDRITVEDQGLYTCQATNERGSAESSAYIWVHNSSEGLSLEIPTLTCTCLVATL
FWLLLTLFIRKLKKPNSSSGKAEYLSIILDPGEGPLEEQCDRLQYDPGQWEFPRDRLKLE
KPLGRGAFGKVMQASAFGIDNSTGCRTVAVKMLKEGATPSDHKALMTELKILNHIGHHLN
VVNLLGACTKAGPLMVIVEYCRYGNLSTYLKSKRDVFLLNKDGKKRCFEEREGTEERGVS
KSPLFLEDLISFSFQVSRGMEFLASRKCIHRDLAARNILLSENKVVKICDFGLARDLYKD
LDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPYPGLNIDEEFC
HQLKEGTRMRSPEYSTPEIYSTMLACWEANPSDRPTFTGLVETLGDLLEARVQQDGKDYI
PLGTFLCGGRDPDSSVQRDSTESSLTDLHPHRLISLGYMNTRSTATLRTFEELPSKDPPG
PDDEQGDSGMVLPSEELKRLKWISGAKSLTRSFSISTCRENLVPCMCNDITGLHDDEPPV
LPCDCDSEESCSPPPDYNSAFLYPSL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgattggctatatcttcgtggttctgtgtggattggctggcagtgcgctcgcaaagggt
aaggtggagagtgtgcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagactctgacaatccactgcaggggtcggtgggagctg
tcgtgggcattccctggaggtgtggccagagatcaggagagaatgcgattggaagattct
cgttgtggtaggcagagccagcattactgcagccaactgacacttagctcggcccaggcc
cagcacacaggatcgttccggtgtcggtacagtcatcggacgctcaggcagagaggtgtc
tatgtctatatcacagacagacagcggccatttgtggaggagcagaataacagtccagac
gtggtgtatatgaaggagagccagcctctggtcttcccctgtagagtcaccaaccctgac
gccactgtctcattggtcaagtttcctgaccaggagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccacagccccacctacttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacgcactccctcaattacctcacacacaga
caagtgaataagatcatgaaggtatatctgaacagtaccagtccagtgcagtctctacag
ggggagagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctggacaggccaacaggtcagccatagtcagtaggtggatcatggcc
agtaaatttcacatggtgttctacagtattctgtccatccccaaactccaccgctctgac
agagggctttatatctgccgagtgaccagtggaccggtcagtcgagagactaacgtatct
gtcacagtctatgaccgtccctttatccgtctgaagcccagacagggggctgaagtggag
gctcatgcaggacagaagtcataccgtctctcccccaaactacgggccttccctgcccca
gaagtcatctggttgaaggatgggaaggtggcagcggaggagtgttcccgttaccatgtg
gacgggaattccctggtgatccgtgatgtggtggaggaggatgctgggaagtacactatc
ctggttggaatccaggaacacagactctaccagaacctaacgctctctcttgtggtcaac
gtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggtagtgttccgcgg
ggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcacatcgcatgg
ctctggcacccctgccccccgaaaggcctgtgtgtgtgtcccccgtcctcctcaatgtgg
agccccgtaaaagagagggcccccggcacttccacacacaaccacatcctgagtgtcaca
cacagacgagaagtcctccaggggaagaataagaccgtgggggttttgatggttgctgag
gcgtttgtgtccggcgtgtatcgctgtattgcctctagttctgtgggcaaggatgagctg
gacatgcccttctatataacagacgtcccaggaggcttcagtgtgagtcaggaggatgag
ccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtacaccaat
ttttcatggcaacgggtgactgacccagcagaggccacacccccgaccccctccctgggt
ggtgaactgtcctcaggagaggccacacccccgactccctccctgggtggtgaactttcc
tcaggagagttttctgacactctgagtctattgcttagcaacctgacggcgggggattct
gggacctaccgctgctccgccaatcacctgctgacgggacagaacacacatctggacaca
caggtggacgtcacagtactggaggctccggtgctgttacagaatctgtctgactgcagc
gtgaacatcagcagctcagtgacactcagctgccgcgcccacggagtgccacgcccattc
atcacatggtacaaggaccaacacacactgcttcagggatcaggtatcgtcatagcacaa
ggaggcgagaacctccacattgaccgaatcacagtggaggaccagggtctgtacacctgc
caggcaaccaatgagagaggctctgctgagagctccgcctacatctgggttcacaactca
tcggagggcctgtctctggagatccctactctcacctgtacctgtctggtggctactctc
ttctggctgcttctcactctcttcatacgtaaactcaaaaagccaaactcttcgagtggc
aaggctgagtacctttcaatcatcctggacccaggggaggggcctctggaggagcagtgt
gataggctacagtacgacccaggccaatgggagttccccagagaccgcctcaaactggag
aaacctctgggccgtggggcctttgggaaagtcatgcaggcgtctgcctttggcatcgac
aactctacaggctgcaggactgtggctgtcaagatgctcaaggagggggctactcccagt
gaccacaaggctctgatgacagaactgaagatcctgaaccacatcggccaccacctgaat
gtggtcaacctgctgggagcctgcaccaaggcagggcctctcatggtgatagtggagtac
tgtaggtatggaaacctatccacctacctgaagagcaagagagacgtgttcctgctcaac
aaagatgggaagaagaggtgtttcgaggagagagagggcacagaggagaggggtgtctcc
aagtctcctctgttcctggaggatctcatctccttcagtttccaggtgtctcgaggcatg
gagttcctcgcctctcgcaagtgtatccaccgtgacctggctgccaggaacattctgctg
tctgagaacaaagtggtgaagatctgtgactttggtctggccagagacctctacaaagac
ctggactatgtccgcaagggagacgcaaggctgccattgaagtggatgtccccagagtcc
atctttgacaaagtgttcacgacccagagtgacgtgtggtcctatggagttctgctctgg
gagatattctctctgggagcctctccgtacccaggcctgaacatagatgaggagttctgt
caccaactaaaggagggaacacgcatgcgatccccagagtacagcactccagaaatttac
agcaccatgctggcatgctgggaggctaacccctcagaccgccccaccttcactggctta
gtggaaacactgggagacctgctggaagcacgggttcaacaggatgggaaggactacatt
cccctgggcacgttcctgtgtggagggagagacccagacagcagcgtccagagagactcc
acagagagctccctgactgacctgcatccacacagactcatcagcctaggctacatgaac
accaggagcacagcgacactcaggacctttgaggaactgcccagcaaggacccgcctggc
ccggatgatgagcagggagacagcgggatggttcttccctctgaggaactcaaacgcctc
aaatggattagcggtgccaagagcctcacaaggtcctttagcatcagtacgtgcagggag
aacctggtgccctgcatgtgtaatgacatcactggtctccatgacgacgagccgcctgtc
ctcccatgcgactgtgactcagaggagagctgttcccctccaccagactacaactctgcc
ttcctctacccctccctctga
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