Oncorhynchus gorbuscha (pink salmon): 124039556
Help
Entry
124039556 CDS
T07892
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
ogo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124039556
04020 Calcium signaling pathway
124039556
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124039556
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124039556
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124039556
Protein kinases [BR:
ogo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
124039556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
124039556
NCBI-ProteinID:
XP_046211610
LinkDB
All DBs
Position
LG07:complement(16717148..16818018)
Genome browser
AA seq
1286 aa
AA seq
DB search
MIGYIFVVLCGLAGSALAKGKVESVPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWAFPGGVARDQERMRLEDSRCGRQSQHYCSQLTLSSAQAQHTGSFRCRYSHRTLRQRGV
YVYITDRQRPFVEEQNNSPDVVYMKESQPLVFPCRVTNPDATVSLVKFPDQELTPDQRNI
VWNSRQGFLIHSPTYFYIGLFSCKTSVNGTTHSLNYLTHRQVNKIMKVYLNSTSPVQSLQ
GESLAINCTVTAEWNSRVSISWDYPGQANRSAIVSRWIMASKFHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPFIRLKPRQGAEVEAHAGQKSYRLSPKLRAFPAP
EVIWLKDGKVAAEECSRYHVDGNSLVIRDVVEEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPHIAWLWHPCPPKGLCVCPPSSSMW
SPVKERAPGTSTHNHILSVTHRREVLQGKNKTVGVLMVAEAFVSGVYRCIASSSVGKDEL
DMPFYITDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAEATPPTPSLG
GELSSGEATPPTPSLGGELSSGEFSDTLSLLLSNLTAGDSGTYRCSANHLLTGQNTHLDT
QVDVTVLEAPVLLQNLSDCSVNISSSVTLSCRAHGVPRPFITWYKDQHTLLQGSGIVIAQ
GGENLHIDRITVEDQGLYTCQATNERGSAESSAYIWVHNSSEGLSLEIPTLTCTCLVATL
FWLLLTLFIRKLKKPNSSSGKAEYLSIILDPGEGPLEEQCDRLQYDPGQWEFPRDRLKLE
KPLGRGAFGKVMQASAFGIDNSTGCRTVAVKMLKEGATPSDHKALMTELKILNHIGHHLN
VVNLLGACTKAGPLMVIVEYCRYGNLSTYLKSKRDVFLLNKDGKKRCFEEREGTEERGVS
KSPLFLEDLISFSFQVSRGMEFLASRKCIHRDLAARNILLSENKVVKICDFGLARDLYKD
LDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPYPGLNIDEEFC
HQLKEGTRMRSPEYSTPEIYSTMLACWEANPSDRPTFTGLVETLGDLLEARVQQDGKDYI
PLGTFLCGGRDPDSSVQRDSTESSLTDLHPHRLISLGYMNTRSTATLRTFEELPSKDPPG
PDDEQGDSGMVLPSEELKRLKWISGAKSLTRSFSISTCRENLVPCMCNDITGLHDDEPPV
LPCDCDSEESCSPPPDYNSAFLYPSL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgattggctatatcttcgtggttctgtgtggattggctggcagtgcgctcgcaaagggt
aaggtggagagtgtgcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagactctgacaatccactgcaggggtcggtgggagctg
tcgtgggcattccctggaggtgtggccagagatcaggagagaatgcgattggaagattct
cgttgtggtaggcagagccagcattactgcagccaactgacacttagctcggcccaggcc
cagcacacaggatcgttccggtgtcggtacagtcatcggacgctcaggcagagaggtgtc
tatgtctatatcacagacagacagcggccatttgtggaggagcagaataacagtccagac
gtggtgtatatgaaggagagccagcctctggtcttcccctgtagagtcaccaaccctgac
gccactgtctcattggtcaagtttcctgaccaggagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccacagccccacctacttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacgcactccctcaattacctcacacacaga
caagtgaataagatcatgaaggtatatctgaacagtaccagtccagtgcagtctctacag
ggggagagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctggacaggccaacaggtcagccatagtcagtaggtggatcatggcc
agtaaatttcacatggtgttctacagtattctgtccatccccaaactccaccgctctgac
agagggctttatatctgccgagtgaccagtggaccggtcagtcgagagactaacgtatct
gtcacagtctatgaccgtccctttatccgtctgaagcccagacagggggctgaagtggag
gctcatgcaggacagaagtcataccgtctctcccccaaactacgggccttccctgcccca
gaagtcatctggttgaaggatgggaaggtggcagcggaggagtgttcccgttaccatgtg
gacgggaattccctggtgatccgtgatgtggtggaggaggatgctgggaagtacactatc
ctggttggaatccaggaacacagactctaccagaacctaacgctctctcttgtggtcaac
gtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggtagtgttccgcgg
ggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcacatcgcatgg
ctctggcacccctgccccccgaaaggcctgtgtgtgtgtcccccgtcctcctcaatgtgg
agccccgtaaaagagagggcccccggcacttccacacacaaccacatcctgagtgtcaca
cacagacgagaagtcctccaggggaagaataagaccgtgggggttttgatggttgctgag
gcgtttgtgtccggcgtgtatcgctgtattgcctctagttctgtgggcaaggatgagctg
gacatgcccttctatataacagacgtcccaggaggcttcagtgtgagtcaggaggatgag
ccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtacaccaat
ttttcatggcaacgggtgactgacccagcagaggccacacccccgaccccctccctgggt
ggtgaactgtcctcaggagaggccacacccccgactccctccctgggtggtgaactttcc
tcaggagagttttctgacactctgagtctattgcttagcaacctgacggcgggggattct
gggacctaccgctgctccgccaatcacctgctgacgggacagaacacacatctggacaca
caggtggacgtcacagtactggaggctccggtgctgttacagaatctgtctgactgcagc
gtgaacatcagcagctcagtgacactcagctgccgcgcccacggagtgccacgcccattc
atcacatggtacaaggaccaacacacactgcttcagggatcaggtatcgtcatagcacaa
ggaggcgagaacctccacattgaccgaatcacagtggaggaccagggtctgtacacctgc
caggcaaccaatgagagaggctctgctgagagctccgcctacatctgggttcacaactca
tcggagggcctgtctctggagatccctactctcacctgtacctgtctggtggctactctc
ttctggctgcttctcactctcttcatacgtaaactcaaaaagccaaactcttcgagtggc
aaggctgagtacctttcaatcatcctggacccaggggaggggcctctggaggagcagtgt
gataggctacagtacgacccaggccaatgggagttccccagagaccgcctcaaactggag
aaacctctgggccgtggggcctttgggaaagtcatgcaggcgtctgcctttggcatcgac
aactctacaggctgcaggactgtggctgtcaagatgctcaaggagggggctactcccagt
gaccacaaggctctgatgacagaactgaagatcctgaaccacatcggccaccacctgaat
gtggtcaacctgctgggagcctgcaccaaggcagggcctctcatggtgatagtggagtac
tgtaggtatggaaacctatccacctacctgaagagcaagagagacgtgttcctgctcaac
aaagatgggaagaagaggtgtttcgaggagagagagggcacagaggagaggggtgtctcc
aagtctcctctgttcctggaggatctcatctccttcagtttccaggtgtctcgaggcatg
gagttcctcgcctctcgcaagtgtatccaccgtgacctggctgccaggaacattctgctg
tctgagaacaaagtggtgaagatctgtgactttggtctggccagagacctctacaaagac
ctggactatgtccgcaagggagacgcaaggctgccattgaagtggatgtccccagagtcc
atctttgacaaagtgttcacgacccagagtgacgtgtggtcctatggagttctgctctgg
gagatattctctctgggagcctctccgtacccaggcctgaacatagatgaggagttctgt
caccaactaaaggagggaacacgcatgcgatccccagagtacagcactccagaaatttac
agcaccatgctggcatgctgggaggctaacccctcagaccgccccaccttcactggctta
gtggaaacactgggagacctgctggaagcacgggttcaacaggatgggaaggactacatt
cccctgggcacgttcctgtgtggagggagagacccagacagcagcgtccagagagactcc
acagagagctccctgactgacctgcatccacacagactcatcagcctaggctacatgaac
accaggagcacagcgacactcaggacctttgaggaactgcccagcaaggacccgcctggc
ccggatgatgagcagggagacagcgggatggttcttccctctgaggaactcaaacgcctc
aaatggattagcggtgccaagagcctcacaaggtcctttagcatcagtacgtgcagggag
aacctggtgccctgcatgtgtaatgacatcactggtctccatgacgacgagccgcctgtc
ctcccatgcgactgtgactcagaggagagctgttcccctccaccagactacaactctgcc
ttcctctacccctccctctga
DBGET
integrated database retrieval system
