Oncorhynchus gorbuscha (pink salmon): 124039912
Help
Entry
124039912 CDS
T07892
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124039912
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124039912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124039912
Membrane trafficking [BR:
ogo04131
]
SNARE
SNARE associated proteins
Others
124039912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
124039912
NCBI-ProteinID:
XP_046212420
LinkDB
All DBs
Position
LG07:45245868..45272865
Genome browser
AA seq
1060 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKSGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTEVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAYYQPSALLLDPEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPATQADAVDLPSLTKHKNSWDTMSLSSGGSDTVEVQHVG
AGVLGRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDPKSPDKDPWPCELEISAGLE
NDVNAKGPLKDDLADFRESATFSQDSMHEDLYVSTLGADHLSENTASSGSDGEAQGPFTP
LTGSSNPASVGSDQEELSNKTHVPSEVYSHTEVPSSHSDCVERTAITPHLPVTETPKEKK
TEDSAKSTTAPSAHTNLCLTTSVHSRRMSTDSITHSHSWISEDDIYKPHLEELVDPDESL
LGSGPACVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGLWRDY
YCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLHLRAANHDEA
EDWVDRIAEAVSKCRPLHLLDDHSEVLQPIDSFVILEEPPKSSPSPSVPTSPEQGGTVVE
QQPPLELDWTRPTDPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNGFRVQDGRKVL
CCSHPIEGIRDVVPDVSLGGPAFFRVVTIGDTLKLRAKSPEEACAWRGLIRGALDSYLES
GENGEPNSPGLATGAGGNIHRLVQHRLKGGGVLLAHLYTVPTEKGLDLQGFKCAGCPKLV
GVSRGKARLCEFSGKYYCDACHQGDVIAIPSRMVHNWDITPREVSRQALELLAQVEHEPL
LNLHLLNPNLWEHVEAMAQAHSLRQRLQLVGKYLLTCRSGPCKDIQTRLGLRTYLLESSH
LYSVMDLQQIAEGTYVAYLNMLILFASNHVQQCDLCTQRGYICQICHASDIIFPFQFDTT
VRCKECKAMFHATCKAESSSCPRCMRIQRYLESDLLDCSV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagacaccagatactgggccagaggcggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctacgtgatgactgatgct
gtagtaaccagcgaggatggcgacgccaacctgctgtgctcttctctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaagtccggaggacatggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagccttctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggaggtgggtcgctgc
cgggcttggctgcggctggccctcaaccacggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaacctgcaggcctactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctggtcttcaacctt
tcgtacaagtcagccgtgctcaatgagtggaccaccaccccactggctctggccggcctc
tgccccgccacccaggccgacgctgtcgatcttcccagtctcaccaaacacaagaattct
tgggatacgatgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgtgggg
gcaggggtgctagggagggtgattggtggagtctcagggggtaggacccctctgaattct
tcaaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcggac
cccaagagcccagacaaggatccctggccatgtgaactggagatctctgccggactggag
aacgatgtcaatgccaaggggcctcttaaagatgatctggcagacttcagggagagtgcc
accttcagtcaggactccatgcacgaggatttgtacgtttccactctgggtgcagaccac
ctctcagagaatacggcctccagtggctctgacggcgaggcccaggggccattcacaccc
ctcactggctcctctaaccctgcttcagtggggtcagaccaggaggagctgtccaataag
acccatgtcccttccgaagtgtactcgcacactgaagtgccctccagtcacagtgactgt
gtggagagaacagcgataacgcctcacctgcctgtcacagagacgccaaaggagaaaaag
acagaagattccgcgaagagcaccacggcgccttcagcccacacaaacctatgcctcact
accagtgtgcatagcaggaggatgtctacagactcaatcacacattcccactcctggatc
tctgaggatgacatctataagccacaccttgaggaactggttgaccccgatgagtcatta
ctagggtctggcccagcttgtgtgaatggattgacctctccccctccagagcctgagact
ccccagtctccccccagcgtggttcaccgcaggcagataggcctgtccaaccctttccgt
gggctgctgaagctgggccatctggagcggcggggcgctgtgggcttgtggcgggactac
tactgcgagctctcgcccttcgagttccgcctctacctgaacgcagaggagcgcacctgc
tgtgacaactgctccctgctgcgttgcgaagacgcccgcgtcacctccgccgagggccgc
ttcgacctggccttcccagggaagaggctccacctgcgggcagccaaccacgacgaggca
gaggactgggtggaccgcatcgcagaggccgtcagcaagtgccgcccgttgcacctcctt
gacgaccattcagaggtgctgcagcccattgacagctttgtcatcctggaagagccccca
aaatcttccccttccccctccgtacccaccagccctgagcaagggggtactgtggttgag
cagcagccgccacttgagctagactggacgcgtcccacagaccctgagtcagacgccatt
aaggaggcggtgctgtacctatcccaggacgcagaggctcgtaactggactcctctggtc
ttctccctctccttggagactctcaacggcttccgggtacaggatgggcgaaaggtgctg
tgctgctcccaccccatcgaggggatacgggacgtggtcccagatgtttctctgggggga
ccggccttctttagggtcgtaacgatcggagatacgctcaagctgagggccaagagccct
gaggaggcgtgtgcctggaggggcctcatcaggggagccctggactcctacctggagagt
ggagagaacggggagcctaatagccccgggttagccactggggcaggggggaacatccac
agactggtgcagcatagactgaaggggggcggggtgctgctggcccatctatatacagtg
cccacggagaagggcctggaccttcagggcttcaagtgtgcaggttgtccaaagctggtg
ggggtctcccggggaaaagccagactgtgcgagttctcagggaagtactattgcgacgct
tgtcaccaaggtgacgtcatcgccataccctcccgcatggtgcataactgggacatcacg
cctcgcgaggtctccagacaggccctcgaactgctggctcaggttgaacatgagcccctg
ctcaaccttcaccttttgaaccctaacctgtgggagcatgttgaggccatggcccaggca
cacagtctcagacagaggctgcagctggtaggaaagtacctgctcacctgccgcagtggg
ccatgcaaggatattcagaccagactgggcctaaggacatacctgttagaatcaagccat
ctctacagtgtcatggacttacaacagatagcggagggaacatatgtggcctacttgaat
atgttgatcctgtttgcctccaaccacgttcaacaatgtgacctttgcacccagaggggc
tacatctgccagatctgtcatgccagtgacatcatcttccccttccagttcgacaccact
gtcaggtgtaaagagtgtaaggcaatgtttcacgcaacctgcaaggccgagtcgtcctcc
tgtccacgatgcatgcgtattcagaggtacctcgagagcgatctgcttgactgctctgtt
tga
DBGET
integrated database retrieval system
