Oncorhynchus gorbuscha (pink salmon): 124041766
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Entry
124041766 CDS
T07892
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K20894
shank-associated RH domain-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04217
Necroptosis
ogo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124041766
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124041766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124041766
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
124041766
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124041766
NCBI-ProteinID:
XP_046215715
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Position
LG08:complement(49032214..49036781)
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AA seq
440 aa
AA seq
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MALSSGGWGKPPVPAPSQSVHGGPALANCNTVLMSVRVSVCHSGIRPLCLPGAGDEALRL
QLSMDPSKAGEFRLALRDISGSGRSVFIAEFDLRSVQYEVKSPCLHEMRLATPPHDCIRF
NFRCDLEAEQWATVVMSSLREAHRVAVNSSPHPMDDRQQHEAAALEQRSTASLPLTEELC
LELARAIEAGDSQGAAQHASALARQKAVLTIQLSEKSYAEGEISLSVAVEDISSSCCVTV
KVFPHMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQRDGDTAYLYLVSA
RHARLTRQLFQQDQEGAHLTPPPPTSNGPLSQDWRGYSTLPSRLSHNTQGSTGSGAERLG
TSEIRDALNLETLHLKDKPDKPSKTSKTQTEWACPSCTFINKPTRPGCEICSTARPDSRK
HSRIQQEKGRREEQISALSS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagttctggcggttggggtaaaccgcctgtgccagcgccgtcccagtctgta
catggcgggcccgcgctggcaaactgcaataccgttttgatgtcggtacgggtgtctgtt
tgccattcgggtattcgaccgctttgcctccctggagctggcgatgaggctctccgtctt
caacttagcatggaccccagcaaagctggagagtttcggctagcactgagggacattagc
ggaagcggccgtagtgtgttcattgcggagtttgacctgcgctctgtgcagtatgaggtc
aagtccccatgccttcacgagatgcgcttggccacaccccctcatgactgtatccgcttc
aacttccgctgcgacctggaggctgagcagtgggccactgtggtgatgtcatcactaaga
gaggcacacagagttgctgtaaatagttccccacatcctatggatgaccgacagcagcac
gaagcagcagctctagaacagcgcagcacagcctccttaccactcactgaggagctgtgc
ttggaacttgcccgggcgatcgaggcaggtgacagccagggtgctgctcagcacgcgtct
gctctagctcgtcagaaggcagtgctcactatccaactgtctgagaagagttacgccgag
ggagagataagtttgtctgtggcagtggaagacatctcctcttcctgttgcgtcacagtg
aaagtctttccccacatgactgtcgcagcactcaagcagcaggtgtttttggagtatggc
tttcaccctcgcgtgcagcgctgggtgattggacaatgcctgtgcacagagcctaggtcc
ctggcctcatatggggtccagagggatggggatacggcctacctttacttggtctcagcc
cgccatgcccgcctcacccgccagctattccagcaggaccaggagggtgcccacctcacc
ccacctccgcctaccagcaacgggcctctttcccaggactggcggggctacagcaccctg
ccctccaggcttagccacaacacccaggggagcaccggaagtggggccgagaggttgggt
acgagcgagatccgagacgccctcaacctggagacgctgcatcttaaagataaacctgat
aagcccagcaaaaccagtaaaacacagaccgaatgggcgtgtccctcctgcaccttcatc
aacaagcctacccgaccaggctgtgagatctgcagtacagccagacctgactcacgcaag
cacagccgcatacaacaggagaaaggaagaagagaggagcagatcagtgcattgagcagt
taa
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