KEGG   Oncorhynchus gorbuscha (pink salmon): 124042669
Entry
124042669         CDS       T07892                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010  MAPK signaling pathway
ogo04060  Cytokine-cytokine receptor interaction
ogo04150  mTOR signaling pathway
ogo04210  Apoptosis
ogo04217  Necroptosis
ogo04350  TGF-beta signaling pathway
ogo04620  Toll-like receptor signaling pathway
ogo04621  NOD-like receptor signaling pathway
ogo04622  RIG-I-like receptor signaling pathway
ogo04625  C-type lectin receptor signaling pathway
ogo04920  Adipocytokine signaling pathway
ogo05132  Salmonella infection
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124042669
   04350 TGF-beta signaling pathway
    124042669
   04150 mTOR signaling pathway
    124042669
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124042669
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124042669
   04217 Necroptosis
    124042669
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124042669
   04621 NOD-like receptor signaling pathway
    124042669
   04622 RIG-I-like receptor signaling pathway
    124042669
   04625 C-type lectin receptor signaling pathway
    124042669
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    124042669
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124042669
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124042669
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ogo04052]
    124042669
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124042669
Cytokines and neuropeptides [BR:ogo04052]
 Cytokines
  Tumor necrosis fators
   124042669
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Cytokines
   124042669
SSDB
Motif
Pfam: TNF DUF2537
Other DBs
NCBI-GeneID: 124042669
NCBI-ProteinID: XP_046216706
LinkDB
Position
LG09:9340863..9343778
AA seq 243 aa
MEGDCSRVTVDLENGPVSPTVTLVREKSTRRWRMCGALLAMALCVSAALFFTCHSKKQDH
TGKADEIQHTLRQLSGNRKAAIHLEGEYNANGDYKSSVEWTDDEGQGFSQGDLKLNNNEI
VIPQTGLYFIYSQVSFHVSCKADPKHANNQDMVHLSNTVTRWSPSYGTEDNKEYQTLLNS
VRTVCKKSSNSEAASEGKWYNAVYMGAVFSLEKGDRLRTVTENRLLPHLESGAGKNFFGV
FAL
NT seq 732 nt   +upstreamnt  +downstreamnt
atggaaggtgattgcagcagagtgacggtggacttggagaatggccctgtgtcaccgacc
gtgaccctggtgcgggagaagtccacacgacggtggaggatgtgtggtgccctgctggcc
atggcgctgtgtgtctcagctgcactcttctttacctgtcactccaagaaacaagatcac
accgggaaagctgatgaaattcagcataccctgagacaactctctggaaacagaaaggct
gctattcatttagaaggtgaatacaacgccaatggtgattacaagtcctcagtggagtgg
acagatgacgagggccagggattctcacagggggatcttaaactcaacaacaacgaaatt
gttattccccagacgggcctctactttatctacagccaggtctctttccacgtcagctgc
aaggccgaccccaagcacgctaacaaccaggacatggttcacctgagtaacacggtcacg
cgctggtccccaagctacggcaccgaagacaacaaggagtaccagacgctgctcaactcc
gtacgcaccgtgtgtaagaagtcttccaacagcgaggctgccagtgaaggaaaatggtat
aatgccgtgtacatgggagccgtgttcagcctggagaagggagacaggctgcggacagtc
acagagaacaggcttctgccccatctggagagcggcgctgggaagaacttctttggcgtg
ttcgccttgtaa

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