Oncorhynchus gorbuscha (pink salmon): 124043639
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Entry
124043639 CDS
T07892
Name
(RefSeq) exostosin-1b-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ogo01100
Metabolic pathways
Module
ogo_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124043639
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124043639
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
124043639
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
124043639
Glycosyltransferases [BR:
ogo01003
]
Glycan extension
O-Glycan
124043639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
124043639
NCBI-ProteinID:
XP_046218388
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All DBs
Position
LG09:42105815..42204904
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AA seq
740 aa
AA seq
DB search
MQAKKRYLILLSAGTCLVLLFYFGGVPLPSSGRNRHDRSHNGYRPDQPWPHFSDPLQQFL
LWDQPDTEEYNIHISPRQKRDVNTSVYKGKRCRMDSCFDFSACKRNDFKVYVYPQQKGEK
ISESYQNILSIVEGSRFYTTDPGQACLFILSLDTLDRDSLSPQYVHNLKTKVQNLHLWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTEIFRPNFDVSIPLFSKEHPRTGG
DRGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNQEDVVLLTTCKHGKDWQK
HKDARCEKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIINWNTAAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLQQESRSTLMWNSHPGGLFALPQYSAHLGDFPFYYATLGIKPYPKFTAVIHA
VTPLVSQSQPILKLLVSVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERLVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPVSLKGMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGGMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttaatcctgctctctgccggtacatgtctagttctactg
ttctactttggaggtgtaccacttccatcttcgggcaggaaccggcatgaccgtagccac
aatggatatcgccccgaccagccgtggccacacttctcggaccctttacaacaattccta
ctctgggatcaaccggacaccgaggaatacaacattcacatatcgccaaggcaaaagagg
gacgttaacacaagtgtgtacaaaggcaaaagatgtcgcatggattcgtgctttgatttc
tcagcatgcaaaaggaacgatttcaaagtgtatgtctacccccagcagaaaggggagaaa
atctctgaaagttaccagaatattttgtcgattgttgagggatccaggttctacaccact
gacccgggtcaagcttgtctattcatcctgagcttggacaccctggaccgggactcgctg
tctccgcagtacgtgcacaatctcaaaaccaaggtccagaaccttcatctctggaacaat
ggcagaaaccacctcatatttaacttgtactctgggacatggccggactacacggaagac
ctaggtttcgacataggccaggccatgttggccaaggccagcatcagtaccgagatcttc
aggcccaactttgacgtgtccatcccgctgttctccaaggagcaccctaggaccggaggg
gacagggggtacctaaagtacaactccatcccacctttcaggaaatacatgctcgtgttt
aaggggaagcgataccttacagggatagggtcagacacgaggaatgccttatatcatgtc
cataaccaggaggacgtggtgctcctcaccacctgcaaacacggcaaggattggcagaaa
cacaaggacgcacgctgtgaaaaggacaacgcagaatatgacaaatacgactacagagag
atgctacacaactctactttctgcctggtgccccggggcagacgcctgggatcctttcgc
ttcctggaggcgctgcaagcagcctgtgtgcctgtgatgctgagtaacggctgggagctg
cccttctctgagatcatcaactggaacacggcggccgtcatcggggacgagaggctcctg
ctgcagatcccatccacggtgcgttccatccatcaggataagatcctagctctgaggcag
cagacccagttcctttgggaggcctacttctcctctgtggagaagattgtgctgaccact
ctggagatcatccaggaccgggtgctgcagcaggagtccaggagcaccttgatgtggaac
agccaccccggggggctctttgccctgccacagtactctgcccacctgggagacttcccc
ttctactacgccaccctaggtataaaaccgtaccccaagttcacagcagtcatccatgca
gtcacccccctggtctcccaatcccagcccatcctcaagctgctggtgtctgttgccaaa
tcacagtactgtgcacagatcattgtgctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgccacctccgtgcccgtcattgtcatcgagggagaaaacaaggtgatg
agcagtcgcttcctgccctacgagaccattgtcaccgacgctgtgctcagtctggatgag
gatacggtgctctcgaccacagaggtggactttgccttcacggtgtggcagagctttcca
gagaggttggtgggctacccggcccggagccacttctgggacagtaacaaggagcgctgg
ggctacacttccaagtggaccaacgactactccatggtgctgaccggagctgccatctac
cacagatattaccacttcctttacacaaacttcctgcctgtcagcctgaagggcatggtg
gaccagctggccaactgtgaggacatcctcatgaacttcctggtgtccgccgtcaccaag
ctgccgcccatcaaggtcacccagaagaagcagtacaaagagaccatgatgggacagtcg
tcgcgggcttcgcgctgggccgacccggaccacttcgcccagcggcagacgtgcatgaac
aagttcgccagctggtttggcggcatgcccctggtccactcccaaatgaggctggacccg
gtgctgttcaaggaccaggtctccatcctgcgcaagaaatacagggacatcgagaggctc
tga
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