Oncorhynchus gorbuscha (pink salmon): 124043751
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Entry
124043751 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124043751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124043751
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124043751
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124043751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-RING_2
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
zf-RING_11
LPP
DUF5799
zf-RING_10
Cnd1
UvrD_C
Motif
Other DBs
NCBI-GeneID:
124043751
NCBI-ProteinID:
XP_046218633
LinkDB
All DBs
Position
LG09:52972366..52974282
Genome browser
AA seq
350 aa
AA seq
DB search
MDIQRTGSLVRPPSPMESLEKQLSCPICLEMFTKPVVILPCQHNLCRGCASDLYDSRNPY
RFSGGVFRCPTCRFEVVLDRHGVHGLQRNLLVENIIDIYKQQQEGGGGSGSGDSTETPLK
PKDSKEPMCQEHEEEKINIYCVTCQMPTCSMCKVFGQHKDCEVSPLASVYQVQKGELSNA
IDTLVAGNGRLQALLNQMEDTCQAVQDNAQRAKQSLGERFDLLYAVLEERKGLLLEQIGK
EQDEKVTALRALAQHYSERLQAGSELTDTAVRALEQSSAAEFLLASKGLITQTKDTAKIS
LGEERPEPGFEKMDHFTLSTEHVEAILAKMDFGMVEDDAFEDAEGDEEEE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacatccagaggaccggctcgttggtgcgtccacccagccccatggagagcctggag
aagcagctgagctgccctatctgcctggagatgttcaccaagcccgtggtcatcctgccc
tgccagcacaacctgtgccgtggctgtgccagtgacctctacgactcacgcaacccctac
cgcttctcgggcggcgtcttccgctgccccacctgccgcttcgaggtggtcctggaccgc
catggcgttcacggacttcagcgcaacctgctggtggagaacatcattgacatctacaag
caacagcaggagggtggcgggggtagtggcagcggagacagcacagagactccactgaag
cccaaggactccaaggaacctatgtgccaggagcacgaggaggagaagatcaacatctac
tgtgtgacctgccagatgcccacctgctccatgtgcaaggtgtttggccagcacaaggac
tgtgaggtgtcaccactggccagtgtctaccaggtgcagaagggcgagctgagcaacgct
atcgacaccctagtggcaggcaacgggcgccttcaggccctgctcaaccagatggaggat
acatgtcaggcggtgcaggacaacgcacagcgtgccaagcaaagcctaggcgagcgcttt
gacctgctctacgcagtgctcgaggagcgcaaaggcctgctgctggaacagatcggcaag
gagcaggacgagaaggtgactgcgttgcgggcgctggcccagcactacagcgagcgactg
caggcgggatcagagctgacggacacagcggtgcgggccctggagcagagcagcgccgca
gagttcctgctggcctccaagggccttatcacacagaccaaggacaccgccaagatctcc
ctgggcgaggagaggcccgagccgggctttgagaagatggaccatttcacgctgtccact
gagcatgtggaggccatcctggccaagatggactttggaatggtcgaagacgatgcattc
gaggatgccgaaggggacgaagaagaggagtga
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