Oncorhynchus gorbuscha (pink salmon): 124043863
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Entry
124043863 CDS
T07892
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04081
Hormone signaling
ogo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124043863
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124043863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124043863
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124043863
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
RA_2
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
124043863
NCBI-ProteinID:
XP_046218901
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Position
LG09:60421265..60468718
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AA seq
876 aa
AA seq
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MAGLLAPSYGVMESGGPSPDRMPDKENISNNSSGSISKHLSKKSFTESPDKIHPKSISQV
PSEKIMRAGKVLRDAILSRAPHIIRDRKYHLKTYRQCCVGTELVDWQMQQSSCVRSRIQA
VGMWQVLLEEGVLNHVDQELTFQDKYLFYRFLDDEQDDAPLPTEKEARESDEELQDTLLL
LSQIGPDAHMRMILRKQPGQRTTDDLEIIYEELLHIKALSHLSTTVKKELAGVLIFESHA
TAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVL
RDDNCHFLRVDKEDFNRILKDVEANTVRLKEHYQDVLVLEKSPSSQASTCGSTTTTATSS
HYKYTVMSGTPEKILEHFLEMMRLDSHLNESDPALDDFVLMHCVFIPNSQLCPVLMAHYH
AEASQGSEQERLDYTLNNKRRVIRLVLQWASVHGDHLQEEDASLAFLEEFFVSVSDDARV
IPALKDQLPELEKIVKNNSGDARSSQQKHKILLRQFSMGDERLQKRQAIKSNDEILFKVY
CSDHTYTTIRVPMAASVSEVISAVADKLGSAEDLLLVNLSSAGDKVVLNPNDISVFSTLS
INGRLFVCPGDQLDSLIPLPEQEGPSTGSLGSFELMSSKDLAYQMTLYDWELFHCVHEHE
LIYYTFGRKNFKKTTANMDLFLRRFNEIQLWVITEICLCAQLSKRVQLLKKFIKIAAHCK
EYKNLNSFFAIIMGMSNPAVSRLSQTWEKLPSKFKKFYSEFESLMDPSRNHRAYRLTVAK
LDPPIIPFMPLLIKDMTFTHDGNKTFIDSLVNFEKMRMIANTVRIVRYCRSLPFSAEPSQ
TSKNHLDVRSYVRQLTVIDNQRTLSQFSHRLEPRRT
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggctggactgctagccccatcttatggagttatggaaagtggtggacccagccctgac
agaatgccggacaaagagaacataagcaacaactcttctggatccatctctaaacatctg
agtaagaaatccttcacagaaagcccagacaaaatccatcctaaatccatttctcaggtc
ccatctgagaagatcatgcgagcagggaaggttctacgtgatgccatcctctccagagct
ccccacatcatccgagacaggaagtaccacctgaagacatacaggcaatgctgtgtggga
acagagctggttgactggcagatgcagcagagctcctgtgttcgctctcgcattcaagca
gtgggcatgtggcaggtgctgctggaggaaggagttctcaaccacgtggaccaggagctg
accttccaggacaagtatctgttctaccgtttcttggatgatgagcaggatgacgctccc
ctgcccactgagaaggaggccagggagagtgatgaggagctgcaggataccctcctcctc
ctctcccaaataggccctgacgcacacatgcgcatgatcctgaggaaacagccaggacag
aggacaacagatgatttggagataatttatgaggagctgctccatataaaagccttatcg
cacctttccaccactgtaaagaaggagttagccggagtcctaatctttgagtcccatgcc
acagcaggaaccgtgttgttcaatcaaggggaggaaggcacatcgtggtacatcattcta
aagggctctgtaaacgttgtcatttatggaaagggggttgtttgcacgctgcatgaggga
gatgactttgggaagcttgccctggtcaacgatgccccccgcgccgcctccattgtccta
cgagacgataactgccacttcctacgtgtggacaaggaggacttcaatcggatcctcaaa
gatgtggaggccaacacggtgcgtttgaaagagcattatcaggatgttctggtcctggag
aagagccccagcagccaggcctccacctgtggctccaccaccaccacagccacctcctca
cactataaatacactgtgatgtccgggacaccggagaagattctggagcactttctggaa
atgatgcgactggactctcaccttaacgaatcagatccagctctggacgactttgtgctc
atgcactgcgtcttcatccctaacagtcagctgtgtccggtgctcatggcccactaccat
gctgaggcgtcccagggctcagaacaggagcgtcttgactataccctgaacaacaagagg
agggtgatcaggctggtgctgcagtgggcctcagtacatggagaccacctgcaagaggag
gatgcctccctcgccttcctagaggagttctttgtgtctgtatctgatgatgccagggtg
attcctgctctgaaagatcaactcccagagttagagaagatcgttaaaaacaactctggt
gacgccagatcctctcaacaaaagcacaaaatcctgttgaggcagttcagcatgggggat
gagaggctgcagaaacgacaggccatcaagagtaatgatgagatcctgttcaaagtgtac
tgcagcgaccacacctacaccaccatccgggtccccatggccgcctcggtcagcgaggtc
atcagcgcggtggccgacaagctggggtcagcggaggaccttctcctggtcaacctcagt
tcggccggagataaagtggtgctaaaccccaacgatatttccgtcttctccacactcagc
atcaacggccgtctatttgtctgtcccggggatcaactggattcattgattcccttacca
gagcaggaaggaccctccacaggctccctgggcagctttgagttgatgagctctaaagac
ctggcctaccagatgactctctacgactgggaactcttccactgtgtacatgagcatgag
ctgatctactatacatttgggaggaagaacttcaagaagactacggccaacatggacctg
ttcctcaggaggttcaatgagattcagctgtgggtgatcacggagatctgtctgtgtgct
cagctcagcaagcgtgttcagctgctcaagaagttcatcaagatcgctgcccactgtaag
gagtataagaacctcaactccttcttcgctattatcatgggcatgagtaacccagccgtg
agcagactgagtcagacatgggagaaactacccagcaaatttaagaagttttacagcgaa
tttgaaagcttaatggacccgtccaggaaccaccgggcgtaccggctcactgtggccaag
ctggacccgcccatcattcccttcatgccgctgctgatcaaagacatgactttcactcat
gatggaaacaagacgttcattgacagtttggtcaattttgagaaaatgcgaatgatcgca
aacacagtgagaatagtgagatactgcagaagtctgccattcagtgcagaaccatctcag
accagtaagaaccacctggacgtgaggagctatgtgcgccagctgactgtgattgacaac
cagagaaccctatctcagttttcccacagactggaaccacgcaggacatga
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