Oncorhynchus gorbuscha (pink salmon): 124044002
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Entry
124044002 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124044002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124044002
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124044002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
124044002
NCBI-ProteinID:
XP_046219230
LinkDB
All DBs
Position
LG09:complement(68712103..68821486)
Genome browser
AA seq
1521 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPTDYYHLMASGRSTYG
DLIMQTGAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLNQQRGLS
AFGHTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITK
RHKVKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWVGCSKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSRRGMDGKMEAN
STIRGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSF
GDLSALDDPPMVDSSTLSPRTSVGVGLGLHKGGGVTIKLENIKKERLKNVRDSCPWANSG
PQAPQVRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGDLSSCEVTMLNQLNEQGRRDS
NTSTASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEAS
QCGGGGGNLSSLLSLTPAQHYHLKAKYAAAIGGAPPTPLPNMERMSLRTRMALYGDHSQE
RESLSHSQLFHPPTAAVPRRCSDIGYGSHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPR
VQRYNSMNSMNPNSMMPPPSADRRGLAMQSYTRSDGSLHHHPFAPRPPSISENVVMETMA
VEGLDHAGDEDMVLPDDVVQYLRSQNTGPGQSAGPANYANSQSQGGFQVQGNMTSSQQQF
YGQRRMAMVDANMPLPGSSQVPLPPYQMSPGSGSQQQQYPASHSMNNKNNMPVQWNEVSS
GTVDATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMNQNMALQGYTQ
RSNSQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSFRPNINGMALPN
GRVMATHNNPDTQIYRSRTPVESYAPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPME
PKSMSSRQHSGSRGMMQQNRFPQSDLHHNTSEASPKRPGSTAAHTGGHNRDSNSNASMFY
AGQIQMFEPNNNHNVSFNSPMSPVMGQTPGGTTVTIASPGVNQVTSTVDSSGSSGSISGV
EHAQIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAI
GDMSSMLTTLAEESKFLNMMS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgaaaaaaaggagcataagggatcgggtctagat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggtcct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtaccattacgagccacatcccctccacgccatgcatggacatcatggcctagcaggc
agtccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggacg
ggggattcccccttcagcccccctcactcttacgtccacccccagatggagcactacctc
cgctccatgcacagcagccccaccctctccatgatctctgctgcccgcggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctacagattactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagcagcagcagcagcagccgcacacctgcct
gactacatcagccctgtggatgtgtcccggttctccagccccagactgacccccaggctg
aacagaaagcgagccctgtccatctcccctctctcagacgccagcatcgacctgcagacc
atgatccgtacctcgcccaactccctcgtggcctacattaacaactcacgttccagctct
gcagccagcagctcctacggacacctgtccgtcagcggcatcagtccgtcgttcaccttc
ccccaccccatcaaccccatggcctaccagcagctgctcaaccagcagagaggcctgagt
gcgttcggccatactcctccccttatccagccctcgccctccttcgctgcccgccagcat
gcccacgccctggcagcctccaccctcaacaccacccacaacacctccagctctgagtcc
aaccagaatgctggtggtgacccggcggtgagcagcacagtcaaccccatgatcaccaag
aggcacaaggtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggag
catgtcctggacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggct
gtctacgagaccaactgtcactgggtcggctgcagcaaggagtacgacacccaggaccag
ctcgttcatcatatcaacaatgaccacatccacggggagaagaaggagtttgtgtgtcgc
tgggatgagtgctcacgggaacagaagcccttcaaggctcagtacatgctggtggtccat
atgaggagacacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcc
tactctcgcctggagaacctgaagacccatctgaggtctcacacaggggagaagccttac
gtctgtgaacacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcac
cagaacagaactcactccaatgagaaaccctacatctgtaagatccctgggtgcactaag
cgctacacagaccccagctctctcaggaagcatgtgaagacggtccacggacctgaggcc
cacgtcacgaagaaacaacgtggcgatgtgccccccaggggtcctcctaaggggaatgga
gagaacgaggcaaacgccaaacagagtcgtagagggatggatggaaaaatggaggctaac
agcaccattagaggagcagaggactgcctgcaggtcaagtcaatcaagactgagaactca
ataacgtatcaatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccctgcacagtgggggcagcttt
ggggacctgagtgcactggatgaccctcccatggtggactcctccaccctctccccccgc
acctcggtgggggtgggtcttgggcttcataaagggggaggagtcaccatcaagctggag
aacatcaaaaaggagaggctcaagaatgtgagggactcttgtccctgggccaactctggt
cctcaggcacctcaggtccgaaacaccaagctgcctcccattcctgctgttggttccctt
ctggaaaactctaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgac
ctgtcatcatgcgaggtgaccatgctgaaccagctaaacgaacagggccgccgggacagc
aacaccagcactgccagctcagcctacatcagccggcgctcctctggcatctccccctgc
tactccagccgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagc
tcagccgactcctacgaccccatctccacagacctgtcccgtagatccagcgaggccagc
cagtgtggaggtggaggtggaaacctctctagtttgctcagcctcacccctgcccagcac
taccatctcaaggccaagtacgctgctgcaatcgggggagctccacctacacctctgccc
aacatggagcgtatgagcctcaggaccaggatggccctgtacggggaccactcccaggaa
agagagagcttatcccactctcaactgttccacccacctaccgcagcagttcccagacgc
tgcagcgacattggctatggtagccatagcatgatgccccacgaggtccctgggaacctt
ccccggcgagccagcgaccccgtccgcagacctaccctagacccactatcccttccacga
gtccaacgctacaacagcatgaacagtatgaaccccaacagtatgatgcctcctccctct
gccgaccgccggggcctggccatgcagagctacacgcgatccgacggaagcctgcaccac
caccccttcgccccacggccccccagcatctcagagaacgtggtgatggagaccatggcc
gtggaagggctggaccatgcaggagatgaggacatggtgctgcctgatgatgtcgtacag
tacctgaggtctcagaacactggccccggccaatctgcaggccccgccaactacgccaac
agccaatcacaaggcggcttccaggtccaggggaatatgacctcctcccaacagcagttc
tatgggcagaggaggatggccatggtggatgccaacatgcccctgcctgggtcaagccag
gttcccctacccccctaccagatgagccctgggtctggctcccagcagcagcagtaccca
gcctctcacagtatgaacaacaagaacaacatgccagtccagtggaacgaggtcagctca
gggactgtggatgctacagccacctccagactcaccaagcagaacctcctcagaaacaac
aacctggccatggtccagcagagacagaactttgggcatttccagggtagaatgggtagt
aacagtaaccagcaggtgatgcccatgaaccagaatatggcgctacaaggctacacccag
agaagcaactcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatg
aactatcctgagcagatgagtccccagcagggatatggccaagagatcatccctgtccct
aactctggatctgggaatggcagctttcgacccaacattaatggcatggcactgcccaat
ggcagggtgatggctacacacaacaatcctgatacgcagatctacaggtcaaggactccg
gttgaaagctatgccccccacatgattcaagttgaccagcagaactacagtatttcttct
cagcagcaagacgtcaatactgggaacagagctgggatgcagcccaggcctcccatggag
cccaagtctatgagcagtagacaacactcagggtccagaggtatgatgcagcagaaccgt
ttccctcagtctgacttacatcacaacacctctgaggccagtccaaagagaccgggtagc
accgcagcacataccggcggacataacagagactcaaactccaatgcttcaatgttttat
gctggccagatccagatgtttgaacccaataacaaccacaatgtgagcttcaactccccc
atgtcccccgtcatgggccagactccgggaggcaccactgttaccatagcatctccaggg
gtcaaccaggtcaccagcaccgttgactcatccggctcctctggatcgatctcaggtgtg
gagcatgcccagatcgactttgacgccatgttggatgatggagaccactccagcctgatg
tcagggacccttagccccggactcctcaccagcctgtcccagaattcctcgaggcttacc
accccacgtaactctgtgaccctggcctctgtgccagcagggattggtaatatggccatc
ggagacatgagctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatg
agctaa
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integrated database retrieval system
