Oncorhynchus gorbuscha (pink salmon): 124046973
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Entry
124046973 CDS
T07892
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124046973
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124046973
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
124046973
NCBI-ProteinID:
XP_046223680
LinkDB
All DBs
Position
LG10:complement(88403431..88448204)
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AA seq
1800 aa
AA seq
DB search
MKKSRGHKSDHGKGGGGDEAAILETEDLDFTGGMGGEGGLDPDTISLASVTAVTTNVSNK
RSKPDIKMEPSAGRPVDYQVSVTIVEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPY
YNEYFVFDFHVPSDVMFDKILKLSVIHSKNLLRSGTLVGSFKLDIGTVYSQPEHQFFHKW
ALLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKATETDEDDIEGNLLLPEGVPAERQW
ARYYVKIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQILFAGQRGKTSIQKSSYEP
IWNEQIVFTEMFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKIANDGDKGFLPTLGPAW
VNMYGSTRSYTIMDEHQDLNEGLGEGVSFRARLLVSLCVEILDTSSPEVMSSTEVKVEGV
PKISESATGKVEEFFLFGAFLEATMIDRKIGDKPICFEVTIGNYGSEIDGVTNLKLSSGK
KSGGDGDEEETELIHGSSDEEEGDDDNDLVSVSTTPPMKPVITDRNYFHLPYFERKPCIY
IKSWWQDQRRRLYNANLIDNIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEDLSNGCSQ
FLTLANKDQNQTGRTKLDKERLKSCMRELENLGQQAKTIRTQVKKNTVRDKIKLVQNFLH
KLRFLADEPQHSIPDIYIWMMSNNKRIAYARVPSKDILYSGVDEETGKDCGKVKTIFLKL
PGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLPNGFEENKMLKGPGSQSAPPISLT
YMMKQIFQLRVHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLMVF
DNVELFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPITKMADEHYGPPRFPPQL
EYYQIYRGNCTAGEMLAAFELLQIGPHGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKY
RIEVLFWGLRDLKRVNLAAVDRPRVDIECAGKGVQSSLIQNYKKNPNFGTLVKMFEVDLP
ENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFIYRAADKEANNWNTQEEIIVNYEP
EPSIKKMETMVKLDSGSDAVVKIEVGEDDKGGKKKKRKKGGDEVEEEEFDESMLDWWSKY
FASIETLMEILKAQEAAMADAEEKEDQDISAEGGEIKPDDSPVKGKKGKGKDKRRPGDMP
EKKKHKLNELQVYPKELEKEFDNFEDWLHTFNLFRGKAGDDDDQNMEDEDRIIGKFKGSL
CMYKVPVSDEMQREMGFDSNMGMFQNIPTNDPINVVVRVYIIRATDLHPADINGKADPYI
AIKLGKSDIKDKENYLSKQLNPIFGKSFDMEATFPMDSTLTVSVYDWDLVGTDDLIGETK
LDLENRYYSKHRAICGLPSKYAVHGYNVWRDPLKPTQILAKLCKEGKLDGPHYGPGGRVK
VANRIFMGPTEIEDENGLKKQTDEHLALTALKHWEDIPRVGCKLIPEHVETRPLLNPDKP
GIEQGRIEMWVDMFPKDMPAPGPAIDIAPRKPKKFELRVIIWNTDEVILEDDDIFTGEKS
SDIFVRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRFIYPFDYLQAEEKIVISKKESMFAW
DETEYKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSINMVLNEQDIPM
VSIFKQRRIKGWWPFLARDENDEFELTGKVEAELQLMTAEEAEKNPVGEGRNEPEPLEKP
NRPDTAFLWFLMPFKAIKNLICNQYFWLTVKLVVALLLVLILGLFIYSMPGYMVKKLMGA
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacgggaaaggaggagggggcgatgaggct
gccatcttggagacagaggacctggacttcacgggagggatgggaggggaagggggtctt
gaccctgacaccatctccctggcctcagtcacagccgtcaccactaacgtctccaacaag
agatcaaaaccagacattaagatggaacctagtgccgggagaccagtggattaccaagtt
agtgttaccatcgtagaggccagacagctagtagggctgaacatggacccagtggtctgt
gtggagatcggagacgataagaagtacactcagatgaaggagtcgacaaactgcccatat
tacaatgagtattttgtctttgacttccacgtcccatcggatgttatgtttgacaagatc
ctgaagctttcggtcatccactccaagaacctgctgcgtagtggcaccctggttggctcc
ttcaaactggacataggcaccgtctactcacagccagaacaccagtttttccacaaatgg
gcccttctctctgaccctgatgacatcactgccgggtgcaaaggttacattaaatgtgac
atcgccgttgtggggaaaggagacaacatcaagactccccacaaggccacagaaaccgat
gaagatgacatagaaggtaacctgctgttacctgagggggttcctgcggagcgccagtgg
gctcgctactatgtgaagatctacagagccgagggccttcccaagatgaacaccagcatc
atggctaatgtcaagaaggcttttataggggagaacaaggaccttgtggacccttatgta
caaatactgttcgctggccagagggggaaaacatctatccagaagagcagctacgagccc
atctggaacgagcagatcgtcttcactgagatgtttccaccactctgcaaacgcatgaag
gtccagatccgagactcagacaaagtgaacgacgtggccctcggaacacacttcattgac
ctgagaaagatcgccaatgatggagacaaaggcttccttcccaccctgggtccggcctgg
gtaaacatgtatggctccacccgtagctacaccatcatggacgagcaccaggacctgaac
gagggtctgggggagggggtgtccttcagggcccgtctgctggtcagcctgtgtgtggag
atcctggacacctcctctccagaggttatgagctccacagaggtcaaggtggagggggtg
cccaaaatctcagagagcgccacagggaaagtggaggagttcttcctcttcggggcgttc
ctggaggccaccatgattgacaggaagatcggggataaaccaatctgcttcgaggttaca
ataggtaactatgggagtgagattgatggtgtgaccaatctaaagttgagtagcgggaag
aagagtgggggagacggagatgaagaggagacagagctgatccatggatctagtgatgaa
gaggagggagatgatgacaatgacctggtctcagtgtccaccaccccgcccatgaaacca
gtcatcaccgacagaaactatttccacctgccttactttgagaggaagccgtgtatttac
atcaagagctggtggcaggaccagagaagaagactgtacaatgccaaccttatagacaac
attgccgataaactggaggagggtctgaacgatgttcaggaggtcattaagacagaaaag
gcatatcctgaacgcagactgagaggggtcttggaggatctcagcaatggatgcagtcaa
tttctgactctggctaacaaggaccaaaaccagactgggaggaccaagctggacaaagag
agactcaagtcctgcatgagggaactggagaacttaggtcagcaggctaagaccatcagg
acgcaggtgaagaagaacacggtgagggataagatcaagctggtgcagaactttctccac
aagctcaggttcctagctgatgagccgcagcacagcatccctgacatctacatctggatg
atgagtaataacaagcgaatcgcctacgcccgtgtcccctccaaagatatcctgtactcc
ggggtggacgaggagactgggaaggactgtggcaaagtcaaaaccatcttccttaagctg
cctggtaagaagggctttggggcagctggctggacagtgcaggcgaagacagagatctac
ctgtggctgggtctgaaccgtcagaggaaagacttcctgtctggtctgcccaatggcttc
gaggagaacaagatgctgaaaggacctggctcgcagtctgctcctcccatcagcctcaca
tacatgatgaagcagatctttcagctgagggtccatatgtaccaggctcgcagcctgttt
gcggcagacagcagcggcctctctgaccccttcgccagggtcttcttctccacacacagc
caggtcacagaggtgttgaatgagacactgtgtcccacctgggaccagctgatggtgttt
gacaacgtagaactgttcggagaggtcggcgaactcagggacgaccctcctataatcgtc
atagaaatctatgaccaggacacggtgggcaaagcagagttcatgggcaggactttcgcc
aagcccataaccaagatggctgacgaacactacggacctccacgtttccctccccaacta
gagtactaccagatctatagggggaattgcaccgctggagagatgctggcagccttcgaa
ctgctgcagattggtccgcatggtaaagctgacctgccgcccatcgacggtcccacagac
atggaccgtggtcccatcctacctgtccctctgggcatcagaccagtcctcagcaagtac
aggatcgaggtgctgttctgggggctcagggacctgaagagggtcaacctagccgcggtg
gacaggcctcgtgtggacatagaatgtgccggtaaaggggtccagtcttctctgatccag
aactacaagaaaaatcctaacttcggcaccctggttaagatgtttgaggtggatctgcct
gagaatgagctgctccaccctcccctgaacatcagagtggtggactgcagagcgttcggt
cgctacaccttagtggggaaccatgctgtcaccacactacgcaagttcatctaccgggca
gcagacaaggaagccaacaactggaacactcaagaggagatcattgtcaactacgagcca
gaaccctccatcaagaagatggagaccatggttaagctggactctggatctgatgcggtg
gttaaaattgaggtaggtgaggatgataagggagggaagaagaagaagagaaagaaggga
ggagacgaggtggaggaggaagagtttgatgagagcatgttggattggtggtcaaagtac
ttcgcctcaatcgaaactctgatggagattctcaaggctcaggaggcagctatggcagat
gctgaggagaaagaggaccaagatatttctgctgagggtggagagatcaaacctgatgac
tctcctgtcaaaggaaagaaaggaaaaggaaaggacaagaggaggcctggagacatgcca
gagaagaagaagcacaaactcaatgagctgcaggtataccccaaggagttggagaaggag
tttgataactttgaagactggcttcacaccttcaacctgttcagagggaaggccggagac
gacgacgaccagaacatggaggatgaggacaggattattggcaaattcaaaggttctctg
tgcatgtacaaagttccagtgtcagatgagatgcagagggagatgggcttcgactccaac
atgggcatgttccagaacattccaaccaacgacccaatcaacgttgtagtccgggtctat
atcatcagggcaacggatctgcatccagcggatatcaatggaaaagctgatccgtacatc
gctatcaaactaggaaagtcagacatcaaagacaaagagaactacctctccaagcaactc
aaccccatctttggcaaatcttttgacatggaagccacatttcccatggactctacacta
acagtgtctgtctatgactgggacttagtgggcactgacgacctgattggggagactaaa
ctggatctggagaaccgttactacagcaagcacagagccatatgtggcctcccatccaaa
tatgccgtccatggctacaatgtgtggcgggaccccctgaagccaacccagatcctggcc
aagctgtgtaaagagggcaagctggatgggccccactatggccctggaggacgggtcaag
gtggccaacaggatcttcatgggcccaaccgagatcgaagatgaaaatggtctgaagaag
cagacagatgagcacctggccctgacggcgctgaagcactgggaggatatccctcgggtg
ggctgtaaactcatcccagaacatgtggagaccaggccactcctcaaccctgataagcct
ggcatcgaacaggggaggattgagatgtgggtggacatgttccccaaggatatgcctgca
cctggaccggccattgatatcgcacccagaaaaccaaagaagtttgaactgagggtgatc
atctggaacacagacgaggtcattctagaggatgatgacatcttcactggagagaagtcc
agtgatatcttcgtgcggggctggctgaaaggtcagcaggaggacaagcaggacacagac
gtccactaccactccctgacaggggagggtctcttcaactggcgcttcatctaccccttt
gactacttacaggccgaggagaagatcgtcatctctaagaaggagtccatgttcgcctgg
gacgagactgagtataagatccctgctcgtctcaacctacaagtctgggatgctgatcac
ttctctgcagatgacttcttaggcgccattgagctggatctgaaccgtttccctcgtgga
gcgaagacagccaaacagtgctccatcaacatggtgctgaacgaacaggatattcccatg
gtgtccatcttcaaacagaggaggatcaagggctggtggcccttcctagccagagacgag
aatgacgagtttgaactcactgggaaagtggaagcagagctgcagctgatgactgcagag
gaggctgagaagaacccagtaggtgaaggacgcaatgaacctgaacccctggagaaaccc
aaccgtccagacacagccttcctgtggttccttatgcctttcaaggccatcaaaaacctc
atctgcaaccagtacttctggctcacggtcaagttagttgtagccctgctgctggtgctc
atcctgggcctcttcatatacagcatgcctggatacatggtcaagaagctaatgggggct
tga
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integrated database retrieval system
