Oncorhynchus gorbuscha (pink salmon): 124047748
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Entry
124047748 CDS
T07892
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124047748 (pus3)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
124047748 (pus3)
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124047748 (pus3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1192
Motif
Other DBs
NCBI-GeneID:
124047748
NCBI-ProteinID:
XP_046224011
LinkDB
All DBs
Position
LG11:27999619..28005341
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AA seq
493 aa
AA seq
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MITLLIKATRQSKDKLFCRLQSNMSEELLQRVRDLEGEVGRLKAQLREKVKEGTEGEMAV
STNSDGKKDTSKPDAGGRKKGKRGSRDRPFDFSAHPRRHVALRLAYLGWAYQGFAVQENT
DSTVEARLFEALLKTRLIQDRQSSNYHRCGRTDKGVSAFSQVMSIDLRSTQFCGGLGVTL
PSNVDAGVKNEVDVAELPYVKMLNRVLPQDIRILDWSPAPQGFSARFDCQSRTYRYYFPR
GALDVTLMAEAAKRYEGTHDFRNLCKMDVGNGVLQFQRTILSATVQPVHQTPPPAPTTAD
PYDLFIFEIKGLAFLYHQVRCIMAVLLLIGQKLEPPEIVDQLLDVKTNPRKPQYSMAVDF
PLVLFDCHFEGLSWRREAEEVEHALATLQHHWTQTAVKTQVIHGMIQGLDSTGGTSSPHC
WLMEGTKQRTYRPLLERPRCESLESRIEHFVKRGRLEREEGENGGETVHKGKRPKHSHKT
SISSVLPDVSPSF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgataaccttactcatcaaagctacacgtcaaagtaaagataagttattttgccgtttg
caaagcaacatgtctgaggaattactacagcgagtgagagacctggaaggagaggtgggg
agactgaaagcacagctgagagagaaggtcaaggaaggaactgagggtgagatggcggtg
tcaaccaactctgatggaaagaaggataccagcaagcctgatgctggtggcaggaaaaag
ggcaaaagagggagtcgggaccgaccgtttgatttctctgcccatcctcggcgccatgtt
gcgctccgcttagcctacctgggctgggcctatcagggctttgctgtccaggagaacaca
gacagcactgtggaagcccggctcttcgaggctcttctgaagactcgactgatccaggat
cgccagagttctaactatcaccgttgtggccgcactgacaaaggagtcagtgccttttcc
caggtcatgtccatagacttgcgctccactcagttttgtggaggcctaggagtgactctc
ccgtccaatgtcgacgctggtgtcaagaacgaagtggacgtggcggagctaccttatgtg
aagatgctgaaccgagtcctgccccaggacatcaggattcttgactggtcacctgctccg
cagggcttcagtgcgcgcttcgactgtcagtctagaacctaccggtactacttcccacgc
ggggctctggatgtaacgttgatggcagaggctgccaaacgctacgaaggcactcacgac
ttccgcaacctctgcaagatggacgtgggcaacggagtgctgcagttccagaggaccatc
ctgtctgccacggtccagcctgtccatcaaactccccctcctgcgcccactaccgcagac
ccatacgacctcttcatatttgagatcaaaggactggccttcctctatcaccaggtgcgg
tgcataatggcagtgctgctgctgattggccagaagctggagcccccagagatagtggat
caactcctggatgtgaagacgaatcccaggaaaccccaatacagcatggcggtggacttt
cccctggtgctgttcgactgccattttgaggggttgagttggcgcagggaggctgaggag
gtggaacatgccctggccacgctgcagcaccactggacacagacagcagtcaagacccag
gtcattcacggcatgatccaaggcctagacagcacaggtgggacctcctctccccattgc
tggctgatggaaggtaccaaacagcggacctatcggcccttgcttgagcgtccacgctgc
gagagcctggagtccaggatagaacactttgttaaaagaggcaggcttgaacgagaagaa
ggggaaaatggtggcgaaacggtacacaagggcaaaaggccaaagcactcgcacaaaacc
tccatttcgtctgtcctccccgacgtgtcgccgtccttctga
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