Oncorhynchus gorbuscha (pink salmon): 124048307
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Entry
124048307 CDS
T07892
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124048307
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124048307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048307
Membrane trafficking [BR:
ogo04131
]
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SNARE associated proteins
Others
124048307
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
NAD_Gly3P_dh_C
Motif
Other DBs
NCBI-GeneID:
124048307
NCBI-ProteinID:
XP_046224908
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All DBs
Position
LG11:complement(22228085..22242477)
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AA seq
1062 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPVAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGV
LGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDLEIS
NMENNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSETQGH
VTHLTGPSNPASLGSDQEEPSTRTHAPSNVYSHIEGPSSLSDCVESTSTTPHLPATEAPQ
GEKTEYSVKSASEPSAHMNLHRTTSVLSRMVSTDSVTHSHSWISEDDIYKPHLEELAYPD
ESLLGSGPACVNGFTSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTVGMW
RDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDACVTSAEGRFDLAFPGKRLLMRAANC
DEAEDWVDRITEAVNKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASPDRG
GAVVEQVQQLELDWTRPTDPESDAIKEAVLYFCQDSEPRIWTPLVFSLSLETLKGFRMQD
GQKVLRCSHPIEGIRDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEARAWRDLIRGALD
SYLESGEDWEPASPGVAPGAGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFKCAG
CPKVIGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLLAQI
EHEPLLNLDLLNPDLWEHAEAMAQAQSHRQRLSLLGDYLLTCRSGACKNIQTRLGPRTYL
LESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSDIIFPF
QFDTTTRCKECKAVSHVTCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggggacgccaatctgctgtgctgcgcactggaggccatcttt
atccacggcatcaaaagcaaatatgttcgctccgaggctgggggacgcggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagctttgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgtcgcccaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcgtccggagggtcggacacggttgaagtgcagcgaggggtg
ctggggaaggggattgggggggtctcagggtttaagaccccactgaattcgtccaatttg
agcctggacaccacagggtcgtctcagctctcctccagtctgagctctgacagtctgctt
caaggccacgaccccaagagcccagacaaggagccctggccatgtgacctggaaatctcc
aacatggagaacaatggcaatgccaagaggcctctcaaagatgttctggcagacttcagg
gagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtccaccccaggc
gcagaccacctctctgagaacactgccttcagtggctccgacagcgagacccagggacat
gtcacacatctcactggcccctctaaccctgcttcactggggtcagaccaggaggagccg
tccaccaggacccacgccccctccaacgtgtactcgcacattgaagggccctccagtctc
agtgactgtgtggagagcacatcgacaactcctcacctgcctgccactgaggcgccacag
ggggaaaaaacagaatattctgttaagagcgcctcggagccttcagcccacatgaaccta
caccgcactaccagcgtgctcagtcggatggtgtctacagactcagtcacacattcccac
tcctggatctctgaggatgacatctataagccacaccttgaggaactggcttaccccgat
gagtctttgctagggtctggcccagcttgtgtgaacggatttacctctccccctctagag
cccgagaccccccagtccccccccagcgtggtccaccgcaggcagataggtctctccaac
cctttccgcggactactgaagctgggacacctggagcggcggggcacggtaggcatgtgg
cgcgactactactgcgagctctcgcccttcgagttccgcctctacctgaatgcagaggag
cgcacctgctgcgacaattgctccctgctgcgttgcgaggatgcctgcgtcacctcggcc
gagggccgcttcgaccttgccttccccgggaaaaggctccttatgcgggcggccaactgc
gatgaggccgaggactgggtggaccgcatcactgaagccgtcaacaagtgccgcccactt
cacctcctcgatgaccagtgggaggtgctgcagctctctgacagcagtgtaaccccggat
gagcccccaaaatcttccccttcgtccccctcctccgtacccgccagtcccgatcgaggg
ggggctgtggttgagcaggtgcagcagctggagctggactggacgcgtcccacagaccca
gagtcagacgccattaaggaagcggtgctgtacttctgccaggactccgagcctcgcatc
tggactcctctcgtcttctccctctccttagagactctcaagggcttccggatgcaagac
gggcagaaggtgctgcgctgctcccaccccatcgaggggatccgggacgtggtcccagac
gtttctatgggtggaccagccttctttagggtcgtaacggccagggatacgctcaagctg
agggccaagagctccgaggaggcacgggcctggagggacctcatcaggggagccctggac
tcctacctggagagtggagaagactgggagccggcgagccccggggtggcccctggggcg
ggagggaacacccacagactggtgcagcatagactgaagggggacggggtgctgctggcc
catctatgcacagtgcccacagagaaggggctggaccttcagggcttcaagtgtgcaggt
tgtccaaaggtgataggcgtctcccgagggaaagccagactgtgtgagttttcagggcag
tactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgcatggtgcac
aactgggaccttgcacctcgggaggtctccaggcatgcccttaagctgctggctcagatt
gaacatgagcccctgctcaaccttgaccttttgaaccctgacctgtgggagcatgccgag
gccatggcccaggcacagagccacagacagaggctgagtctcctaggagactacctgctc
acctgccgcagcggagcatgcaagaacatccagaccagactgggtccaaggacatactta
ttggaatcaagccatctctacagtgtcatggacttacgacagatagcggagggaatgtat
gtggcctacctgaacactttgatccagtttgcctccaaccacgtccaccactgtgacctt
tgcacccagaggggcttcatctgccagatctgtcacactagtgacatcatcttccccttc
cagtttgacaccaccaccaggtgtaaagagtgtaaggccgtgtctcacgtaacctgcaag
gccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctcgagagagatctg
caggactaa
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