Oncorhynchus gorbuscha (pink salmon): 124048417
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Entry
124048417 CDS
T07892
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03440
Homologous recombination
ogo03460
Fanconi anemia pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124048417
09124 Replication and repair
03440 Homologous recombination
124048417
03460 Fanconi anemia pathway
124048417
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124048417
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124048417
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048417
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124048417
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124048417
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124048417
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124048417
Multi subunit type E3
BRCC complex
124048417
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124048417
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124048417
BRCA1-A complex
124048417
BRCA1-B complex
124048417
BRCA1-C complex
124048417
BRCA complex
124048417
FA (Fanconi anemia) pathway
Downstream FA components
124048417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-Nse
PTCB-BRCT
zf-ANAPC11
RTT107_BRCT_5
zf-MIZ
zf-RING_4
U-box
TRAF3_RING
YafT
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
124048417
NCBI-ProteinID:
XP_046225146
LinkDB
All DBs
Position
LG11:complement(26712368..26757034)
Genome browser
AA seq
1560 aa
AA seq
DB search
MNTMMSPKAEDVRHGISVICEILQCPICLELMSTPVSTKCDHQFCKFCIMKLLDSSRRKE
ANCPVCKTKITKRSLQESPGFQKLAEGLQNMIQAYEHDTCTNYFTGMSQVRRHMSVTETV
QKKNGHDVSSDDVWASDRADDEDHEFSMSCSSTIAAKDGFATLMGLEDSCPVISCEGFDS
SLGDIPPATEKHTGDSKAASTTEKQKPALEAEIPEVVERAPSRPQKLGKKITTHPQDPPC
CPEKVRNQPVRRSTRNNKRESLTEMIDQNQKKSLEKVSEWLLNNSSTEVNSEKEKNTEGS
YDSVSLAGSCSPSSPLEDNLINKDQSPKREERGKCLEELVFGAVYKRDRRGNRSFSPQNI
AITDTPPPCPAEELQILKKIAKRRMRNKLTPADFVKRPRSEENEESVMDDQPEMTEPQED
SPNEHPKDTEEDKLIDLTGELNSNSSDKQGEELPEGDNKENEDVEDSPVFDVPLWEPGRK
SNKKMHGRWQDVDGDLQGKVKSENNEQKKPAKKKGENIKVEKSKATKSLVLVGVGEVGSD
SKMPKSRPSGQTEVQIESYPSSEDPGSPIMRRTRRSRRLQLFTEEVQGSNKIGTATSTKV
VVLDLDCNEMQQSKEAKADTDRDNVACLQNQNTEKAVRKNGCVLDEEMGGIESLDSSEKR
LCEMIESQKVNQVEESIVEVPSTGSPCHADVACSVTMVPSSISTPEASVSCAVPESVNQS
NPVIKPLDDLRSNVPQETSASQAKCIDLDEDVRNDSELDTEQLLKSFKATKRKSFHLGSP
NIKRSSFWSNKEITTLTKTQENKHVGTDMEAGNGQGFSRTMECPTVQQESEKGTIFENSC
CSDLSPPSSSLNNISQDKVQRNRKRLRKSILTRPSQDLVDSSNPDTSGKTQKQILSRLSG
NSSKSALSPNKVTKSQMESPHQAVGSGLLFPAFGASKEDLPDPTPVASKQLRVPKSQQPY
KVEGSMSKSPTELESSHSVGSETAVELNKKCPENMTGNMANTESSLTPDGLLPIIQSVVI
QEAQRTKRCGVVSLHSPIKFTLKRRKAQRLESSSESNCSGEEEELPSLAQIFRPSTCPPT
AEEEEESVTLLKDHAREQGSYREAGDAAEDGQRASSPPMCPSPEWVTTSQASVDLFGTPE
EAEGMAGDTGLTQESSQFSSECIATQQKVAMQEELRRLERMMALVSEALQEKEEEEEPTG
AKVYPGAPYPPALLQPDRSTVSSGLDLQVTLPCGQGTRKRSASREGAQNIGGNAASPPPG
LGDCEGLGPTPTTPCRTKHEGPGGTGAGLLGRQSGRSLRSSMRARPNQVSPVVRVHSGTI
APSAGLEVQDTPVVIQPANTHPSTHTPLREPAGVKLVLVVSGLSAPEQSMVKKFAKRMGG
SVCSQVTSETTHVIMNTDGDLVCERTLKYFLGIAGRKWVVSFQWISECFKQGTVLNEASF
EVRGDVVNGHDHQGPMRARTTGDTSLLMKDYEICFQGPFTDMTTGQMEWMVELCGATVVQ
EPLLFTGELKTHQLIVVQPGSDQSPINYQALQRIATVITRGWVFDSVATYTLQSLDNYRT
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatgatgtccccgaaggctgaagatgtcagacacgggatctctgtcatctgt
gagatcttgcagtgtccaatatgtttggaattgatgagcacacctgtgtctactaagtgt
gaccaccagttttgcaagttttgtataatgaagcttttggacagcagtaggagaaaggag
gccaactgtccagtttgtaagacaaagatcacaaaaaggagtttgcaggagagccctggg
ttccagaaattggccgagggattgcagaatatgatccaggcctatgaacatgacacctgc
acaaactacttcactggaatgtcccaggtgaggagacatatgagtgtcacagagactgtg
cagaagaaaaacggccatgatgtctcatctgatgacgtgtgggctagtgaccgtgctgat
gacgaggatcatgagttttcaatgtcctgctcgtcaactatagcagccaaggatggcttt
gcaacgctcatgggtcttgaagattcttgccctgtcatttcgtgtgaggggtttgacagc
agcctaggtgacatacctccagccactgaaaagcataccggtgactctaaagctgcctcc
accacagaaaaacagaagccagcattagaggcagaaatacctgaggttgttgaaagagct
ccttcacgacctcaaaagcttggaaaaaagataaccactcatcctcaagatccaccatgc
tgtcctgaaaaggtcagaaaccaacctgtcagacgatccacgaggaataacaaaagagag
tccttgaccgaaatgattgaccagaatcagaagaaaagtctagagaaagtctctgagtgg
ctcttgaataattcctcaacggaagtaaactctgagaaggagaaaaacacagagggctct
tatgactcagtttctttggcaggaagttgttccccctcctcacccttagaggataacctc
ataaataaggaccagagtccaaagagagaagagcgtggcaaatgtcttgaggagctagta
tttggggctgtttacaaacgggatcgaagagggaaccgcagtttttcaccacagaatata
gcgatcacagacactccaccaccctgtccagctgaggaactccagatcctgaagaagatt
gccaaaaggaggatgagaaataaactgacacctgctgactttgtcaagagaccaagatct
gaggagaatgaagagagtgttatggatgaccaaccagagatgacagaaccacaagaggat
tctcccaatgaacacccaaaagatactgaagaagataagttgattgacctgactggggag
ctgaattctaatagctctgacaagcaaggagaagagttgccggaaggtgacaacaaagag
aatgaagatgtagaggacagtcctgtgtttgatgtgccactatgggaacctgggaggaag
tcaaataaaaagatgcacggtaggtggcaggacgttgacggggatttacaagggaaagta
aagtcggagaataacgagcaaaaaaagcctgccaagaaaaaaggggaaaacatcaaggtg
gagaagagcaaggcaaccaaatccttagtccttgtgggtgtcggagaggttggaagtgac
tctaagatgcctaagagcagaccgtcaggccagaccgaggttcagattgagagttaccct
agcagtgaggatccaggaagcccaatcatgaggagaaccaggaggagtcggaggcttcag
cttttcacagaggaagtacaagggagtaacaagatcggcactgcaacatccacaaaggtt
gtcgttcttgatttagactgcaacgagatgcagcaatcaaaggaggcgaaagctgacacc
gacagggataatgtggcgtgtttgcagaaccaaaatacagaaaaggctgtcaggaaaaac
ggatgtgttttagatgaagaaatgggaggtattgagagcttggactctagcgagaaaaga
ttgtgtgaaatgattgagtcacagaaagtgaaccaagttgaggagtctattgtcgaagtc
ccaagtacaggaagtccttgtcacgctgatgttgcttgttcagtgactatggtaccaagt
tcaattagtacccctgaggcaagtgtctcatgtgccgtgcctgagagtgtaaaccaaagt
aatccggttatcaaaccattagatgacttgagatcaaatgtaccacaagagacgtcagcc
agccaggccaaatgcattgatctggatgaggatgtccggaatgacagtgagctggacact
gagcaactgctgaagagcttcaaagccaccaaaaggaagtccttccaccttggtagtcca
aatatcaagaggagttccttctggtccaacaaggagattacaactcttacaaagactcaa
gagaacaaacatgttggcacagatatggaagcaggaaatgggcagggattttcaaggaca
atggagtgtcccacagtccagcaggaatctgagaaagggacaatattcgaaaattcttgc
tgtagtgatttgagcccaccttcaagttccctcaacaatatttcacaagacaaggtgcag
aggaatcgtaaaaggctcagaaaatccattcttaccagaccatctcaggatttagtggat
tcttcgaaccctgataccagtgggaagacccagaaacagattctgtccaggctttctggc
aacagctcaaaaagtgccctcagtcctaacaaagtcacaaaaagccaaatggaatctccc
caccaagctgtgggttctggtctgctctttccagcttttggcgcctctaaggaagatcta
ccagatccgacacctgtagcttcaaagcaacttagagtccctaaaagtcagcagccatac
aaagtggagggcagcatgagtaaaagtccaacagaactggagagtagccacagtgttgga
tcagagacagcagtggagttaaacaaaaagtgtccagagaacatgactggaaacatggcc
aatacagagtcctccttgactccagatggcctccttccaattatccaatcagtagttatc
caagaggcgcagaggactaaaagatgtggtgtggtcagcttgcactctcccatcaagttc
accctaaagcggaggaaggctcagagactggagtcttcctctgagtccaactgcagtggg
gaggaagaggaactgccttcccttgcgcaaattttcagaccttcgacttgtccaccaacc
gctgaggaggaggaggaatcggtcacattgctcaaagaccatgccagggaacaaggaagc
tacagggaggctggtgatgcagctgaagatgggcagcgagcgagcagtcctcccatgtgc
cccagtcccgaatgggtcaccaccagccaggcatctgtggatctgtttggaacaccagaa
gaagctgaaggaatggcaggtgacactggcctgacacaggaatcatcacaattttcaagc
gagtgtattgccactcagcaaaaggttgcgatgcaggaggagctgcggaggctggagaga
atgatggcgttggtgtctgaagcgctccaggagaaggaggaggaggaggagcccactggg
gccaaagtctaccccggggccccatatcccccagcgctgcttcaaccagacaggtccaca
gtctcctcaggccttgatctccaggtgaccctgccgtgtggccagggcaccaggaagaga
tctgccagcagggaaggtgcccaaaacattgggggaaatgcagcctcaccgccccctggt
cttggagactgtgagggccttgggcccacccccaccacgccctgccgcaccaaacatgag
ggacctggagggactggagcagggctgcttggcagacagtcaggacggagcctaaggagc
agcatgagagcgaggcccaaccaggtgtcgccagtggtcagagtgcacagcgggaccatc
gctccctcagctgggctggaggtccaggataccccggtggtcatccagcctgccaacacc
cacccatcaacacacactccactgcgggaacccgctggggtcaagttggtgctggtagta
tcaggactcagtgcacctgaacagtcgatggtgaaaaagtttgccaagaggatgggaggc
agtgtgtgttcacaagtgacgtccgagaccacccatgtcatcatgaacacagatggtgat
ctggtgtgtgagcgcacgctcaagtacttcctgggcatcgcaggcaggaagtgggtggtg
agcttccagtggatttccgagtgtttcaaacaagggacagtcttaaatgaggcgtcattt
gaggtgcgaggagacgttgtgaacggacatgatcaccaagggcccatgagagcacggacc
acaggggacacaagtctgctgatgaaggattacgagatctgtttccaaggccctttcacc
gatatgaccactggtcagatggagtggatggtggagctttgcggcgcaacagtggttcaa
gagcctcttctcttcactggtgaactgaaaactcatcagctaatagtggtacaaccaggc
tcggaccaatcaccaataaactaccaagccctccagaggatagccacggtcatcacccgt
ggttgggtatttgattccgtggcaacctacacccttcaaagcctcgacaactacagaacg
taa
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