Oncorhynchus gorbuscha (pink salmon): 124048535
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Entry
124048535 CDS
T07892
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124048535
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124048535
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
124048535
NCBI-ProteinID:
XP_046225370
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All DBs
Position
LG11:32904133..33000037
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AA seq
1250 aa
AA seq
DB search
MSDTEGKDGGEMSKTEKDQSWIPKIIKKRVCTTFVEDSFSNGRLCQCGGTRDTHESVALG
DYFSTAIVSHWDSSQHSSEYPTDAFGELEFAGASKRHSKFLRLSWDTPPSIVYTLMTAHW
GLPPPNLVVSVVSGEGRAKVKTWVREVLRQGLVKASQSTGAWILTGGLREGVGRCVGEAV
RDHATAASSVSLNKVVALGIAPWGLVHNRQQLVNPQGSFPARYYFQNTSRDSCCLDNNYQ
AFLLVDDGSVGRRAGEAGFRARLEDYISHQRTGIWGSGSIDIPVLCMLISGETTMLERLD
LSLRNSMPWLVLAGSGGVADLVSDVLESLSSAPPVLSSTEGEGEAGPSVDLKDRVAEMVR
KHFPSETEMDKLVERVLSIYLNRDLITVYHGEQEGPDDFDTVLLKALVRASKQRVSSEAS
PYTEELKLAVTWNRVDIAKSELFNGDIHWRYQDLEDSMTDALVNDKPQFVRLFTENGLNI
LDYLTYGRLESLYRSVADSSLAYVLLQRRLGERQSMTGSQAILPDVSPTKGYGGPPGGRR
PANKFSLFEVSRVLEDLMGDVCQPFYHSPLELENISSQRKALRRVSKLLRGDCLYQDRRC
LFPWASLFVWAVLQNRKDMAVFFWEMAGESVLSALSGCKILRELSKLESETETKLAMKEL
AQRFENLAHDVFSKCYQSSESRSFTLLIRKSPVWGGTTCLKMGMAADARLFFSHDGVQSL
LSQIWWGDMKRSTEVWKLLLTFFCPVLMYTQLISFRELEEPGKPDEVAQGRDNDSLYGET
IFSFSDIKHIEHHTQGPNSPRYHLKGTPDTPPKRPFVVSRWRQFWFAPVTSFLGNVLMYF
LFLLLFAYVLLVDFKPPPPRGPAFAECVLYFWVFTIVCEEIRETFLVGSMMWRQRMRKYI
QDVWNKCDLTAIILFIIGLTCRMFQWSYEFGRAVLCVDYMVFTLHLIHIFAIHKQLGPKI
IIVGKMMKDIFFFLFFLGVWLMAYGVANQALLYSYDPRPAWIFRRVFYRPYLHIFGQVPV
EEIDVRKEWDTECTDNVTLIEGGAEPCRSHYANWLVIVLLVIYLLVTNILLINLLIAMFS
YTFSKVQGQSDTYWKFQRYNLIVEYHSRPSLAPPFIILSHVHLFIKRYIRKVPSVKILHF
VLELTGKAANRLMTWEAIQKENFLTDQSKIQRGSDSERLKRMSVKVDSVLKQMAETRDHD
RRLRALESELEYCSSALSWIMEALSQSNMVKPTRPPPTPREPFPTPSSSI
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacggaaggaaaagacggcggcgaaatgtcaaagaccgagaaagatcagagc
tggatacccaaaattatcaagaaacgagtgtgcacaactttcgtagaggattctttcagt
aatggcaggctgtgtcagtgtgggggtacgcgggacacccatgagtcagtggctctgggg
gactatttcagcacagccatcgtcagccactgggacagctcccagcactcctccgagtac
cccaccgacgccttcggagagctggagttcgccggtgccagcaagagacacagcaaattc
ctgcgtctctcgtgggacacccctccttccatcgtctacaccctgatgacggcccactgg
gggctacctccgcccaacctggtggtgtcagtggtgagcggggagggtagagcaaaggtc
aagacgtgggtacgggaggtcctgaggcagggattggtcaaagcctcccagagtacagga
gcatggatactgactggaggcctgcgtgagggtgtagggaggtgtgtaggggaagcggta
agggaccatgccaccgctgcctcatctgtctccctgaacaaggtggtggctctgggcatc
gctccctggggcctggtccacaaccgccagcagctggtcaatccgcagggtagcttccct
gctaggtactacttccagaacacgtcccgtgactcatgttgcctggacaacaactaccag
gcctttcttctggtggatgatgggagtgtaggccgcagagcgggcgaggcaggcttcagg
gcccggctggaggactatatttcccatcagcgcacaggcatctggggcagtggaagcatt
gacatccccgtcctgtgcatgctgatatcaggagagacaaccatgctagagcggttggat
ctctctctgaggaactccatgccctggctggtgctggcggggtcgggtggtgtggccgac
ctcgtcagtgacgtcctggagagcctatcgtctgcgccccctgtcctgtcctccaccgag
ggggagggggaggcgggacctagtgtggaccttaaagacagagtggccgagatggttagg
aagcactttccatccgaaacagagatggacaaactggtagaacgggttctgagcatctac
ctgaacagggatctgatcactgtctaccacggagagcaggagggaccagatgactttgac
acggtcttgctcaaagccttggttagagcgagtaagcagcgtgtgtcaagtgaagccagc
ccctacactgaggagctgaagctggcggttacctggaacagagtggacatcgccaagagt
gagctcttcaatggagacatccactggaggtaccaggacttggaggactccatgacggac
gcgttggtcaacgacaagccacaattcgtgcgcctcttcaccgagaacggactcaacatc
ctagactacctgacctatgggcggctggagagcctctaccgctcggtggccgacagctct
ctagcctacgtcctgctgcagcgccgcctaggggagcgccagagtatgacaggctcgcag
gccatactgccggatgtctctcctaccaaagggtatggtgggccgccaggggggcggcgg
cctgcgaataagttcagtttatttgaggtgtcgagagtcctggaggacttgatgggggat
gtgtgtcagccattttaccactcaccactggaactggagaacatctcctcccagagaaag
gctctcaggcgtgtgagtaagctgttgcggggtgactgtttgtaccaggacaggcgctgt
ctctttccttgggctagtctcttcgtctgggctgtgctgcagaaccgcaaagacatggcc
gtcttcttctgggagatggcaggcgagtcggtcctcagtgctctgagcggctgtaagatc
ctacgggagctgtccaagctggagagcgagacggagaccaagctggccatgaaggagcta
gcgcagaggtttgagaacctggctcacgatgtattcagtaagtgttaccagagcagtgag
agtcgctccttcaccctgctgatcaggaagtctcccgtatggggagggaccacctgtcta
aagatgggcatggccgccgacgcccgcctcttcttcagccacgatggagtacagtctctc
ctgtctcagatctggtggggggatatgaagaggagcacggaggtgtggaaactcctcctc
accttcttctgtcccgttctgatgtacacccagctcatctccttcagggaattggaggag
ccggggaagcctgacgaggttgcacagggtagagacaatgacagcctttatggagaaaca
attttctccttctctgacatcaagcacattgaacatcatacacagggtcctaatagtccc
agatatcatctaaaaggcacgcctgacaccccacctaaacggccttttgtggtatcccga
tggcggcagttttggttcgcacctgtcacttcctttttaggcaacgttctgatgtacttc
ctgttccttctgctgtttgcctacgtgctattggtggactttaagccgccacccccgcga
ggccccgctttcgccgagtgtgtgttgtacttctgggtgttcaccatcgtctgtgaggag
atccgagagacgttcttagtgggcagcatgatgtggcgtcagaggatgaggaagtacatc
caggacgtttggaacaagtgtgacctcaccgccatcatactcttcatcataggcctcacc
tgcagaatgttccagtggtcctatgagtttggccgagcagtcctgtgtgtggactacatg
gtcttcacacttcatctcatccacatcttcgccattcacaaacaactggggccaaagatc
atcatcgtcggcaagatgatgaaggatatcttcttcttcctcttcttccttggtgtgtgg
cttatggcatatggggtggccaatcaagcactgctgtactcctatgaccctcgccccgcc
tggatcttccggcgcgtgttctacaggccgtacctgcacatatttggacaggtcccagtg
gaggaaatagatgtgaggaaggagtgggacacggagtgcactgacaatgtgacgctgatc
gagggaggcgcggagccctgcaggagccattatgctaactggctagtgattgtcttacta
gtcatctacctactggtcaccaacatcctgctcatcaacctactcatcgccatgttcagt
tacacattctccaaggtgcaaggccaaagcgacacctactggaagttccagcgctacaac
ctgattgtggagtaccactcccggccctcccttgctccccccttcattatcctctcccac
gttcacctatttatcaagagatacatccgcaaggtaccctcggtcaagatcctccatttt
gtattggagctgacggggaaagcagctaacaggttaatgacatgggaggctattcagaag
gaaaacttcctgacagaccagagcaagatccagagagggagtgactcagagaggctcaaa
cggatgtcagtcaaggtggacagtgtgctgaaacagatggctgagacaagggatcatgat
cgcagactgagggctctggaatcggagttggagtattgctccagtgcactcagctggata
atggaagcactctcacagagcaacatggtcaaacccactcgaccaccgccaacacctaga
gagccattccctaccccctcctcttccatctga
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integrated database retrieval system
