Oncorhynchus gorbuscha (pink salmon): 124049064
Help
Entry
124049064 CDS
T07892
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04137
Mitophagy - animal
ogo04141
Protein processing in endoplasmic reticulum
ogo04210
Apoptosis
ogo04217
Necroptosis
ogo04621
NOD-like receptor signaling pathway
ogo04622
RIG-I-like receptor signaling pathway
ogo04920
Adipocytokine signaling pathway
ogo05132
Salmonella infection
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124049064
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124049064
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124049064
09143 Cell growth and death
04210 Apoptosis
124049064
04217 Necroptosis
124049064
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124049064
04622 RIG-I-like receptor signaling pathway
124049064
09152 Endocrine system
04920 Adipocytokine signaling pathway
124049064
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124049064
09171 Infectious disease: bacterial
05132 Salmonella infection
124049064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124049064
04121 Ubiquitin system [BR:
ogo04121
]
124049064
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124049064
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124049064
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124049064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-C3HC4_4
SlyX
zf-RING_5
Sina_ZnF
zf-RING_4
At3g49055
Motif
Other DBs
NCBI-GeneID:
124049064
NCBI-ProteinID:
XP_046226350
LinkDB
All DBs
Position
LG11:complement(62092094..62116281)
Genome browser
AA seq
595 aa
AA seq
DB search
MATEEPSPPSSMESNKPGFPKQILANKLEDKHLCNCCQKLLRRPFQAQCGHRFCSYCFNR
TVRDGPQKCSACIKEDIFEEPTSILKQGCAFPDNAARREVENLSVVCINEGCTWKGNIKE
YELSHEGKCDYMIIPCPSCKEQIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGNKLLELHHSLRELEARVSQLSTTSTGPPVQ
GATNSSSSPGLSGPPALALPLPPPPALAPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA
ELGRRCTDLEVKAGMFENVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLER
TVGLKDLTVAEMEGRLREISGTTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY
GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDA
FRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaagaaccatcccctccgtcgtccatggagagcaacaaacccggcttcccc
aaacagatcctggccaacaagctggaagataaacacctgtgtaactgctgtcagaagctg
ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatagg
actgtcagagatggacctcagaaatgcagtgcttgtatcaaagaggacatttttgaagag
cccacgtcgattctaaaacaaggctgtgcttttcctgacaacgcagctcgacgagaggtc
gaaaacctctctgttgtctgcatcaacgaaggctgtacctggaaaggcaatattaaagaa
tatgagttgagccacgaggggaagtgtgactacatgatcatcccctgcccctcctgtaaa
gagcagatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaact
ctcaactgcaagtactgcaaggaaccattccatttcaaaaacatcaaggcccacgacgag
atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatacccagggag
aagtacgtggaccacattaagttctgcagcaaattcagaactccatgcagattccatgtt
gttgggtgtgatatgtcagtggagaaggagaggatccatgaccacgagagggcctgcgcc
tacgagcacctcaacttgctgctgcactacattatggggatgaaggtgagcatggagggc
ctgcagccgcaaggcctggagctggctggaaacaagctcctggagctccaccattccctc
agggagctggaggcacgcgtctcccagctcagcactacatccactgggcctcccgtgcag
ggggccaccaactcttcttcctccccgggcctctccgggcctcccgccctagctcttccc
ctgcctccacctcccgccctggcccccaccctgactgtgtccacctccttcacccccttg
cccagctcggtgggggcggccctggagctacagctccacagtgagaagaccaaggtggcg
gagctgggacgcaggtgcaccgatctggaggtgaaggcggggatgtttgagaatgtggtt
tgcgtgttgaaccgagaggtggagcgctttgccacaaccatggaggccagtaacagacag
catcgcctagaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg
acggtggggctgaaagacctgacggtagcagagatggaaggcaggctgagggagatatcg
ggcaccacattcgacggcgtcttcatctggaggatttctgactttaccaaaaaaagacag
gatgccatcgctggccgagctcctgccatgttctcaccagccttctacaccagtaaatac
ggctacaagatgtgtctgcggatctacctgaacggggacgggacagggcgtggcagccac
ctgtctctgttctttgtggtgatgaggggactgagtgatgctctgctcaaatggcccttc
aaccagaaggtgactctgatgctgctggaccagagtaacagggagcacatcatcgatgcc
ttccggcccgacgtcacttcctcctccttccaaaggcctgtaagtgagatgaacatcgcc
agcggctgcccgctcttctgcccgctctccaagctcgacgccaagaactcctacatccgc
gacgacaccattttcattaaggccatcgtggatctcacaggcctctag
DBGET
integrated database retrieval system
