Opisthocomus hoazin (hoatzin): 104329304
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Entry
104329304 CDS
T08436
Symbol
NLRC4
Name
(RefSeq) NLR family CARD domain-containing protein 4
KO
K12805
NLR family CARD domain-containing protein 4
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04621
NOD-like receptor signaling pathway
oha05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104329304 (NLRC4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104329304 (NLRC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oha04054
]
104329304 (NLRC4)
Pattern recognition receptors [BR:
oha04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104329304 (NLRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_Nlrc4
NACHT
NLRC4_HD
CARD
LRR_8
NB-ARC
nSTAND_NTPase5
nSTAND3
AAA_22
WHD_NOD2
LRR_4
AAA_30
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
104329304
NCBI-ProteinID:
XP_009932710
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MGMITVKQIADDLLACNVMSYEEVNTIACEKVEQEASRMMIYMILNKGSEACNILVKSLE
KHNPFLFHDLQGYCTTGQVEQDKLNDLIQDLKYVYLSSAFQKYHPLGSDIDIIFDLGTAY
TDVLLWKKDIHNSRKGQLTLNVLLEELKNPCIIEGEAGKGKTTLLKRIAVLWASDNCSAL
KKFQFVFFISLTSTRGGIYETVCDQLLFEQYPIHKQGFMKMLLAQRQRVLFLLDGYDEFK
PQNCPEVEAMIKENHKFKNMVIIATRTESIHKIRQFGSLIAEIGDLSEESCMKLIKNVLT
NKLADGLLNQLKEATSMKTLMKTPLFVIIACAIQMGESNFHPSTQTLLFSTLYDLMVEKN
RYKTKEITENHIMLSIDHCGDLALDGIFDQRFDFQSEDLADVKEEVLLASGLLNKYTAQR
LKPTYRFFHKSFQEYTAGRKLCKLLTSCQEAEVKKGYSYLQKINNISDITNTYFNLLLYT
CGSSLDATKIILDLLKKVDQHRDISQLFSLKDLALESKYTERSENITENEDLNKTNKDIF
ADCVINFFYESSSKSALSRDFEEFFCDKSIYINTQNIPIYFSDFFRYLPNCVSALGLIKL
DFFGNCSPSEEIGDENVKDLQISSLKTYIPEKAVSLFFNWNQSLRSLEITLQDFNKLKKR
DIKYLGKICCSAASLKLCISNSAGITGTLNDVLETCKNLQDLSVESTPLTVEDERQITRM
TKLKTLHVRDLQSENLEGGLIDGIKKLVNAEGLVLDNISMDEGDAKKLAEGIRNLRELRL
LYMNHLTAIGDGIIYIVRSISDELSELEEIQLVNCCVSSDAVEILAQNLCHLPKLNVLDL
SENYLQKKGKDAIHRLVDGLYVLPGMKVLMLPWGDDVKVCLTKLLELLETMPQLTKFGLR
KWSLTDVEVRILGNFFEKEHLENLQHLDLAMNCVTSDGWLSFMQPLISLKKLVFVDFSSK
QDWVPASLLVCKLSQVLTTLNYLKEIKVTGWKFDCHDLGLINGAKVNCRKQFQLVHS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgatcactgtcaagcaaatagcagatgaccttttggcctgcaacgtcatgtct
tatgaagaagtgaataccattgcttgtgaaaaggttgaacaagaagcctcaagaatgatg
atttacatgattttgaataaaggttcagaagcctgcaatattttggtgaagtcacttgag
aaacacaacccttttctctttcatgacctgcaaggatattgtactaccgggcaagtggaa
caagacaaattaaatgacttgattcaggatttaaagtatgtgtatctatcttcagctttt
cagaaatatcatcctcttggtagtgatattgacataatttttgatttgggaactgcgtat
actgatgtcttgctgtggaaaaaagatatacataatagcaggaaagggcagctgacgcta
aatgtccttctggaggaactgaaaaatccctgcattatagaaggagaagctggcaaagga
aaaacaactcttctgaaaagaattgctgtactctgggcttctgataattgctccgctttg
aaaaaattccaattcgttttctttatcagcctgactagcacaagaggtgggatatatgag
actgtctgtgatcagcttctttttgaacaataccccatacacaaacaaggtttcatgaaa
atgctactagcacaaagacaaagggtccttttcctgttagatggatatgatgaattcaaa
ccccaaaactgtccagaggtagaagcaatgattaaagaaaaccacaaattcaaaaacatg
gtcattattgctaccaggacagagtctatccataaaatcaggcagtttgggtcactgatt
gctgaaataggagatctgtcggaggagagttgcatgaagctcattaaaaatgtcttgaca
aataagctggctgacggtctgttaaaccagcttaaagaggccacttccatgaagaccctt
atgaagactccactttttgtcatcattgcctgtgccatacaaatgggtgaaagtaatttt
catccaagcacccagactctacttttctctactttgtatgacttgatggtggagaaaaac
aggtacaaaacaaaagaaataacagaaaatcatattatgctgagcatagatcattgtgga
gacttagctttagatggaatatttgatcaacgatttgattttcagtctgaagatttagct
gacgtaaaagaagaagtcctgctagcttcaggtcttctgaataaatacacagctcaaaga
ctaaagccaacgtatagattctttcataagtcatttcaggaatacactgcaggcagaaaa
ctttgcaagctgctgacatcctgccaagaagcagaggtgaagaaaggctatagttatcta
caaaaaattaataatatttcagatattactaatacttatttcaatttgctcctctacact
tgtggatcctctctagatgctacaaaaataattttggacttactgaaaaaagtcgatcag
catagagatatttctcaactattttcattaaaggatctggctttggaaagcaaatacaca
gaaagatcagaaaatataacagaaaatgaagatttaaataaaaccaacaaggatatattt
gcagactgtgtcattaatttcttttatgaaagttcttcaaaatcagcactgagcagagat
tttgaagagtttttctgtgataaaagtatttacattaatactcaaaatatcccaatttat
ttctctgacttttttagatacttaccgaattgtgttagtgcgctaggactcattaagtta
gatttttttggcaactgctcaccaagtgaggaaataggtgatgagaatgtgaaagatctt
caaattagttcacttaaaacttatattcctgaaaaggctgtctccttattcttcaactgg
aaccagagtctcagatctttagaaattacactgcaagatttcaacaagttaaagaaacgt
gatattaaatatctgggcaaaatatgttgctctgctgcaagcctcaagctgtgcatcagc
aatagtgctggtatcacaggaacattgaatgacgtccttgaaacctgtaaaaacttacaa
gatctttctgtggagtccacacctcttactgtggaagatgagcgacagatcacaagaatg
acaaagctgaaaaccttacatgtgagagatctgcaaagtgaaaatctagaaggtggactt
attgatggaataaagaaacttgtgaatgctgaagggcttgtacttgacaacataagcatg
gatgaaggtgatgcaaaaaaattagctgaaggtatcagaaatctgagagagctacgctta
ttatacatgaatcatttgacagctattggggatggcataatctatattgtaagatcaatc
tctgatgaactgagtgaacttgaagaaatccaactagtcaactgctgtgtctccagtgat
gctgtggaaattctagctcagaatctttgtcatttgccaaaactgaatgtacttgatttg
tcagaaaattacttacaaaagaaaggaaaagatgccatccacagacttgttgatggctta
tatgtcctacctgggatgaaagtcctgatgcttccctggggagatgatgtaaaagtttgc
ctaacaaaattgttagaactactggaaacaatgccacagctgacaaaatttggattgagg
aaatggagcctcactgatgtggaggtcagaattctaggcaatttttttgagaaagaacac
ctggagaacctgcagcacttggacttggcaatgaattgtgtgacaagtgatggctggctt
tccttcatgcagccactgatctctctcaagaagctggtatttgtagatttcagcagcaaa
caagactgggtgcctgcatcactgttagtctgcaaattaagtcaggtactaaccacgctg
aactatttaaaggagattaaagtgactggatggaagtttgattgccatgatcttggactt
attaatggtgcaaaagtaaactgcagaaaacagtttcagctagtgcattcttag
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