Opisthocomus hoazin (hoatzin): 104330076
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Entry
104330076 CDS
T08436
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04010
MAPK signaling pathway
oha04120
Ubiquitin mediated proteolysis
oha04140
Autophagy - animal
oha04144
Endocytosis
oha04620
Toll-like receptor signaling pathway
oha04621
NOD-like receptor signaling pathway
oha04622
RIG-I-like receptor signaling pathway
oha05132
Salmonella infection
oha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104330076 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104330076 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104330076 (TRAF6)
04140 Autophagy - animal
104330076 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104330076 (TRAF6)
04621 NOD-like receptor signaling pathway
104330076 (TRAF6)
04622 RIG-I-like receptor signaling pathway
104330076 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104330076 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
104330076 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oha04131
]
104330076 (TRAF6)
04121 Ubiquitin system [BR:
oha04121
]
104330076 (TRAF6)
Enzymes [BR:
oha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104330076 (TRAF6)
Membrane trafficking [BR:
oha04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104330076 (TRAF6)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
104330076 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
Sina_ZnF
zf-RING_5
SlyX
Med21
RING_XB3-XBAT31
PspA_IM30
TRAF3_RING
zf-RING_11
DUF4455
HAP1_N
Spc29
zf-U1
CENP-F_leu_zip
U-box
UPF0242
ATG16
DUF16
DUF1664
PUMA_CC
HMMR_N
ADIP
CEP104_ZnF
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
104330076
NCBI-ProteinID:
XP_009933540
UniProt:
A0A091W8N6
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLYTDNSCGARDVESGCSSAMASACSAGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNHLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPAL
FSHVSPAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPDRQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFIKDDTLLVRCEVQTRLDLNSLRREGFQARS
TDGAV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctatatactgataacagttgtggagcccgagacgtggaaagtggctgctct
tcagccatggccagtgcctgcagtgcgggagcgaaagaagacagcgtaagcgtcagcagt
gggactggaaaccctccaagttctttcacagaggaaacacagggatatgatgtggagttt
gatccgcccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgagaagca
gtgcagacaccgtgtggacatcgtttctgcaaaggctgcattgtcaaatctataagagat
gcaggtcacaaatgtccagtagacaatgaaattctgctcgaaaatcaactttttcctgac
aacttcgctaaacgggaaatcctttcattaacggttaagtgtcctaacaagggctgcagt
atgaagatggagctgaggcatttagaggaccaccagttgcagtgtgatttttccactgtg
gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacag
gagtgtccaagacgtcaagtctgttgtccaaactgtgccacatctatggcctatgaggat
aaagagctgcatgaccaaacctgcccccttgccaatgtcttttgtgaatattgcaacaca
atgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagta
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcagaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaacatc
agtgttactgctacgaatcctgtacccttcatcaatggcctgccctttgagcctgccctc
ttctcgcacgtgtcacctgctgcatatgattgtaatccagaagttgaaaacttcaaagaa
actattcagcagttggaaggtcgtctggtcagacaagatcaccaaatcagagaactcatt
gccaagatggagactcagaacactcacatggcagaactcaagcgtactatccgaaatttg
gagggaaagattactgaaatggaggcacagcagtgtaatggtatttatatctggaagatc
gagaacttcagtggactccagaaagcccaggaagaagagagacctgttgtgatgcacagt
cctggcttctatactggaaagcctggctacaaactgtgtttgcgcctgcatatccaatta
ccaaatgctcagcgttgtgctaattttatatctctgtttgtccatactatgcaaggagaa
tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcag
tcagaaggccccgacaggcagaatcatgaagaagtaatggaagccaagccagagttactg
gccttccagagaccaacaattcaccgcaatccaaaaggctttggttatgtgactttcatg
cacctgcagaccttgaaacaaagaaccttcataaaggatgatacccttctggtgcgctgc
gaagttcaaacgcgtctagatttaaacagtcttcgcagagaaggatttcaagctcgcagt
acagatggagctgtgtag
DBGET
integrated database retrieval system
