Opisthocomus hoazin (hoatzin): 104332812
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Entry
104332812 CDS
T08436
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104332812 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104332812 (SMG6)
03032 DNA replication proteins [BR:
oha03032
]
104332812 (SMG6)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104332812 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
104332812 (SMG6)
DNA replication proteins [BR:
oha03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104332812 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
PIN_9
Motif
Other DBs
NCBI-GeneID:
104332812
NCBI-ProteinID:
XP_009936558
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MIFSLAENIKEVKEPRHRKDNRRPDLEIYKPGLSRLRGKLLLPKHEASEKERGRAEEEST
SDKVPSGGGAPVMEDFGKCDGPRQNGPSQENEETETKGGLQSQENLSKQPAPDEWVPKTT
RRTKKPDQQIYQPGKRLHSAAKEPSLRSATEEVTSKMEQLKVERDEETEKGTGKDNNRKT
KSSKEEREGSQAGEGAKASRGEKGRRIERSDRIRRTSDEVMRGKLGSTKRYSRSDKRRSR
YRTCSTSSAGSNNSVDGAPLMDRAERRQERARERTRPRKQLSASSTDSLDDDRVDEAEAY
VSSRNLDKKKRSEQSQASRSESEWSSNGREVKGPFRVTFDSKTMNRDISLADTDKKKPLK
AFVSCNDSEASEARSQSREPQGRGPVILFLPANTDLSASTAGSPEPSHPGPRLLLGGAGS
KGPRSRGRGGTARRLWDPNNPDQKPALKSQTAQLHFLDTDDEVSPTSWGEARQAQTSYYK
FQNSDNPYYYPRASGQGPQYPYGGYSLQYPMGPSNGVYPGAYYPGYPGQAGQYVCGPLPP
TPLSPEMEQQMRNMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRAEMLQL
YERCILMDIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKDPQGENAQEIRNKLLQLLDEGT
SFFDGLLQKLQVSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQA
NDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTA
KESLMSLFEETKRKAEQMEQRKHQVLELSPSRRCKGKKSTLRQVGDDATRLEIWIHPSHP
RSSQSHESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEEVLRE
FQVLLQHSPPPIGSTRMLQLVAINMFAVYNSQPKECVSEDCRSVIQEQATALGLSMFALL
VRRCTSLLRECVQVQPQEMEQEDEEDDIKVSALPQDLKELLPSVKVWSDWMLGYPDTWNP
PPTSLELPKQVSVDVWATLADFCNILTTVNQSEVPLYKDPDDDLALLSLEEDRLLSGFVP
LLVAPQEPCYVERTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDA
MGKEMGSQEGKQLEDQEDDVRIEAFEDDSEAEGSGGEMDIKELRAKKQALARKVAEQQRR
QDKIQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLSSLITLLDCRKFILVVPLIVINE
LDGLAKGPEMEHRAAGYARQVQERARKSIEFLEERFESRDNCLRALTSRGNELESISFRS
EDTTGQQGNNDDLILSCCLHYCNDKAKDFMPSNKGETSLFTEKPSPNVYVQMMLNFEIMW
IMGNGA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgattttttccctggctgaaaacatcaaggaagtgaaggagccgaggcatcgcaaagac
aacaggcgcccagacctggagatttacaagcctggcctctcccgactgaggggcaaactc
ctgctaccaaagcatgaggcctcagagaaggagaggggcagagctgaggaggagagcacc
agcgacaaggtcccttcgggaggaggtgctccagtcatggaggatttcggcaaatgtgat
ggccccaggcagaatgggccttcacaggaaaatgaagagacagaaactaaaggtggtctt
cagagccaggagaacttgtctaagcagcccgctccggatgagtgggttcccaagacgacc
aggagaaccaagaagccggaccagcagatctaccagcctgggaaacgcctgcactcagct
gctaaagaaccgtccctgcggtcagctactgaggaagtcaccagtaagatggagcagctg
aaggtcgagagagatgaagagactgagaaaggtactgggaaagacaataacaggaaaacc
aaatcaagcaaggaggagagagaggggagccaggcaggggaaggagcgaaagcctcaagg
ggagaaaagggaagacgaatagagcggagcgacaggataaggagaacaagcgacgaggtg
atgcggggaaagctgggctctaccaaacggtattcccgctccgacaagcggcggagccgg
taccgcacctgcagcacaagctcagctggaagcaacaacagcgtagatggagccccgctc
atggacagggcggagaggagacaggagcgtgccagagaaagaacacgtcctaggaagcag
ctctctgcatcctccactgactccttggatgatgacagagtcgatgaggcagaagcatat
gtctccagcaggaacttggacaagaaaaagcgttcagagcagagtcaggcttctaggagt
gagagcgagtggagcagcaacggcagggaagtcaaggggccttttcgagtcacatttgac
agcaagactatgaacagggatatcagtctggcagatacagataaaaaaaagcccctgaag
gcgtttgttagttgcaatgactcagaggcttcggaggcgaggagccagagcagagagccc
caagggaggggccctgtgattctgttcctgcctgccaacacggacctctctgccagcacc
gcgggctcccctgaacccagtcaccctgggcccaggctcctgctcggtggagctggcagt
aaaggcccccgaagcaggggccgaggcggcactgctcgcaggctgtgggacccgaacaac
ccggaccaaaaacccgccctgaagagccagacggctcagcttcacttcctagacacggac
gatgaagtgagccccacctcttggggggaagcccgccaggcccagacatcctactataaa
ttccagaactccgacaacccgtactattaccctcgggcctccggccaaggcccgcagtat
ccttatggtgggtactccctgcagtatcccatgggtccaagcaacggtgtgtacccagga
gcctattaccctgggtaccctggccaggcggggcagtacgtgtgcggcccgctcccccca
actcctctgagtcccgagatggagcaacagatgcggaacatgcagcagcaggagctcagc
aaactcctccgtgaggctgggaaccaggagcagcagctcagcaatctgctttccagagac
cgcatcagcccagaggggctggagaagatggcccagctgagggcagagatgctgcagctg
tatgaacggtgcatcctgatggatattgagttctccgatacccagaacgtggaccagctg
ctgtggaagaacgcattttaccaggtgattgagaaattccggcagcttctcaaggaccct
caaggggaaaatgctcaagaaattcggaacaaactgctccagcttctagatgagggcact
tctttttttgatggcctactccagaagctgcaggtgtcataccagttcaagctcgaggac
tatatggacgggatggccatccgcagcaagcctctgcggaaaatggtgaagtacgcgctg
atcagtgctcagaggtgtatgatttgtcaaggggacatttgccgatacagagaacaagca
aatgacaccgcaaactacggaaaggcacgcagctggtacctgaaggctcagcaaattgct
cccaaaaacggccgcccatacaaccagctggcgcttctggccatctacacgaggagaaag
ctggatgctgtctactattacatgcgcagtctggctgctagcaaccccatcctcacagcc
aaggagagcctcatgagtctgtttgaggagacaaaacgcaaggctgagcagatggagcag
aggaaacatcaggtgctggagctgagccccagccgccggtgcaagggcaagaagtccacg
ctgcgccaagttggagatgatgccacgcggctggagatctggatccatccttcccacccc
cgctcctcccagagccacgagtccggccgggattctgagcaggacaacggtcttgggaac
ctcagccccagcgacctgaacaaaaggttcatcctcagttttctccatgcccatgggaag
ctgtttaccaggattgggatggagactttccctgcggtggccgaggaggtcctgagggag
ttccaggtcctgctgcagcacagcccccctcccatcggaagcacccgcatgctccagctt
gtggcaatcaacatgtttgcagtgtacaactcccagcccaaagagtgcgtctccgaagac
tgccgctctgtcatccaggagcaggccacggccctggggctctccatgtttgcactcttg
gtgaggaggtgcaccagcctgctgagggaatgcgtgcaagttcagccacaagagatggag
caggaggatgaggaggatgacatcaaggtctctgccttgccccaggacctgaaggagctg
ctccccagtgtgaaggtctggtcggactggatgcttggctacccggacacctggaatcct
cctccaacctcgctcgagctccccaaacaggtctcagtagatgtgtgggcgacgctggct
gacttctgtaacatactgaccacagtgaatcagtcggaggtgcccttgtacaaggaccca
gatgacgaccttgccctgcttagcctggaagaggatcggctgctctcgggcttcgttccc
ctgctggtcgccccccaggagccctgctacgtggagaggacctcggacaaggttattgca
gccgactgcaagagggtcacagtgctgaagtatttcctggaagccctttgtggacaagaa
gagcctttgctggcattcaagggtggaaaatatgtgtcagtggcacccgtcccagacgcc
atgggaaaggaaatgggaagccaagagggaaaacaactggaagatcaggaagatgatgtg
aggattgaggcatttgaagatgattctgaggctgaaggcagtggaggagagatggacatc
aaggagcttagagccaagaagcaagcactggccaggaaagtagctgagcagcagcgtcgt
caagacaagattcaggccgtgctgaaagaccagagtcaaatgaggcagatggagctggag
atcagacctgtcttcctggtcccagacaccaatggtttcatcgaccacctcagcagcctg
ataacgctgctggactgcaggaaattcatcctggtggtgcccctgatcgtgataaacgag
ctggacggcctggccaagggcccggagatggagcaccgggctgcaggctatgcccgccaa
gtgcaggagagagccaggaagtccatcgagttcctggaggagcggttcgagagccgagac
aactgcttgagggctctgaccagccgaggcaacgagctggagtccatctccttccgcagc
gaagacaccaccggccagcagggaaacaacgacgacctgattctgtcctgctgcctccac
tactgcaatgacaaggccaaggattttatgccctccaacaaaggtgaaacatccttattc
acagagaaaccgtcaccaaatgtttatgtgcaaatgatgctgaattttgaaatcatgtgg
attatggggaatggggcctga
DBGET
integrated database retrieval system
