Opisthocomus hoazin (hoatzin): 104334021
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Entry
104334021 CDS
T08436
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104334021 (DHX9)
03012 Translation factors [BR:
oha03012
]
104334021 (DHX9)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104334021 (DHX9)
5.6.2.6 RNA 3'-5' helicase
104334021 (DHX9)
Spliceosome [BR:
oha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104334021 (DHX9)
Translation factors [BR:
oha03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104334021 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
dsrm
Helicase_C
HA2_N
DEAD
HA2_C
AAA_19
ResIII
nSTAND3
Dicer_dimer
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
104334021
NCBI-ProteinID:
XP_009937898
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MERCSGAVVVWAVTLLSRALSSVLVSRRNVRVEGFNYIGMGNSTNKKDAQSNAARDFVNY
LVRVNEMKKEEVPDFGPAAGDTPDGREAARDVTGSSSTMGGPLPPHLIIEAEIGNGQGAA
PGNCGDREAQWDRGANLKDYYSKREEQEAQAVSHSSEVDLSADLHGNWTLENAKARLNQF
FQKEKIQEEYKYTEMGPDHNRSFIAEMNIYVKQLGRRIFSREHGSNKKLAAQSCALSLVR
QLYHLGVIEPYSGQAKKKGESVEPYEVSLSSDLENRLQNAVRELSLEIVPLPEDPSNPVL
INVGKLAHFEPSQRQSQMGVVPWSPPHSNWNPWTGCNIDEGPLANLTPEQISMDLKSDFM
YRLEQDEELQRIQQEREALPVKNFESEILDAIRHNSVVVIRGATGCGKTTQVPQYILDEY
IKTNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGQSCGYSVRFESVLPRPHGSVMFC
TVGVLLRKVEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEIRVILMSATIDTS
MFCEYFFNCPIVEVFGRTYPVQDYFLEDCIQMTQFVPPPKEKKKKEKDEESGEDGDANCN
LICSDEYGPETKHSMAQLNEKETSFELIEALLIYIKTLNVPGAVLVFLPGWNLIYTMQKH
LEMNTRFGGRQYRILPLHSQIPLDEQRRVFDPVPPGVTKVILSTSIAETSITINDVVYVI
DSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFYLCSRARFERLQTHM
TPEMFRTPLHEIALSIKLLRLGAIGQFLAKAIEPPPLDAVIEAERTLRELDALDSNDELT
PLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFICEGKRLGYVHRNFAG
TRFSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKEILINSGF
PEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHNALIHKSSVNC
PFSSQDIKYPSPFFVFGEKIRTRAISAKAMTMVSPLQLLLFASKKALSDGELVLVDDWIK
LKMPHNAAACITALRAAMEALVVEVTKEPSTVRQLDPANEQMLNVIRQISRLAAAGISLM
APNARFGDGPRPPKMARYDAGVFTHGKLIRR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttgctcgggtgcggtggttgtatgggcagtcacgctgctgagccgtgctctc
tcctccgtgttggtgtctcgtcgaaacgttcgagtggaaggctttaactacatcggcatg
ggcaattccactaacaagaaagatgcgcagagcaacgcagctcgagactttgtgaattat
ttggttcgggtgaatgaaatgaaaaaggaggaagttcctgattttggaccagcagctggt
gatacccctgatggacgtgaagcagctagagatgttactggttccagttctactatgggt
ggacctcttcctccacatttgataatagaggccgaaataggcaatggccaaggtgcagca
cctggaaactgtggcgatcgtgaagctcagtgggatcggggtgcaaatttgaaggattac
tattcgaagagagaggagcaagaagcgcaggcagtaagtcattcttcagaagtggactta
agtgccgatcttcacgggaattggaccttggagaatgccaaggcgcgtctgaaccagttt
ttccaaaaggagaagattcaggaagaatataaatacactgaaatggggcctgatcacaac
aggagctttattgcagaaatgaacatttatgtgaagcagctgggcagaaggatcttcagt
cgcgagcacggatccaacaaaaagctggcggcacagtcctgtgcgctgtccttggttaga
cagctctaccacctgggtgtcatagaaccttactctggacaggcaaagaagaaaggagaa
tcggtggaaccctatgaggtgtcgctgtcttctgacctagaaaatcggctgcaaaacgcc
gtacgggaactgtctctggagattgtgcctctgcctgaagatcccagtaatccagttctg
attaacgttggaaagttggcccattttgaaccatctcagagacaaagtcagatgggagtt
gttccatggtcaccacctcattccaactggaacccctggaccggctgcaatatcgatgag
ggtcctctggcaaatctcactcccgagcaaataagcatggatttgaaaagtgatttcatg
taccgcctggagcaggatgaagaattgcaaaggatccaacaagagagagaggctttgcct
gtgaagaattttgaaagtgaaattctggatgcaatccgtcacaattctgttgtcgtaatt
cgtggtgccactggttgtggtaaaaccacgcaagttccgcagtacatcctggatgaatac
atcaaaaccaacagagctgcagagtgcaacatagtagtgacacagcctcggaggattagt
gcggtttctgtagcagagcgtgtgtcatatgagagaggagaagaaccggggcaaagctgt
ggatacagcgtgcgatttgagtcggtgcttcctcgcccgcatggtagtgtgatgttctgc
actgtaggtgttcttctgagaaaggtggaggctgggatccgtggcattagtcacgttatc
gttgatgagatccacgagagagacattaatactgactttcttttggtggtgctgagagat
gtagttcaggcatatcctgaaatcagggttatcctcatgtctgccaccatcgataccagt
atgttttgtgaatacttcttcaattgtcctatcgttgaggtctttggtagaacctaccct
gtccaagattattttctggaagattgcattcagatgactcagttcgttcctccaccaaag
gaaaagaagaagaaagagaaggatgaagaaagtggtgaagatggtgatgccaattgcaac
cttatttgcagtgatgaatacggcccagaaacaaagcactccatggctcagctgaatgag
aaagaaacttcttttgaactcattgaggccttactaatttatatcaagaccctgaatgtc
ccgggagctgtacttgttttcttgcctggctggaacttgatatatacaatgcagaagcat
ctagaaatgaatacacgctttggaggccgccagtatagaattttacctctgcattcgcaa
attcctctggatgaacaacgtcgagtgtttgatcctgtgccccctggagtaacgaaagtt
attttatctaccagcattgcggagacgagcattaccatcaatgatgtggtctacgttata
gattcctgcaaacaaaaagtgaagctgttcactgctcataataacatgacaaactatgcc
acggtctgggcatcaaaaactaatttggagcagcggaaaggaagagctggacgtgtccgt
gctggattttgtttctatttgtgcagcagagctcgcttcgaaaggctgcagactcatatg
acacccgaaatgtttcgaacgccacttcacgaaattgctttgagcatcaaactgctgcgg
ctgggagcaattgggcagtttttggccaaagcgatagaaccgccacctttggatgcggtg
attgaagcagaacgcacgctaagagagcttgatgccctggattccaacgatgagttgaca
cctcttgggagaatcctagccaaacttcccattgaacctcgtctcggcaagatgatgata
atgggctgtattttttatgtgggagatgctgtttgtaccatctctgcggccacctgcttc
cctgaacctttcatctgcgaaggcaaacggctgggttacgtccacaggaattttgctggg
accaggttttcggatcacgttgctttgctctccgtctttcaagcctgggatgatgcaagg
atgggtggtgaagaagcagagaagagattttgtgaacacaaaagactcagcatggccact
cttcgaatgacttgggaagcgaaagtccagctgaaagagatacttattaattcgggcttc
cctgaagaatgtttgatgactcagccgtttaacaacactggaccagataataatctggat
gttgtcatctccctgcttgcttttggggtctaccccaacgtctgctaccacaaggagaag
aggaagattcttaccactgaggggcacaacgcgctcatccacaagtcgtccgtcaactgc
cctttcagcagccaggacatcaagtatccgtcgcctttcttcgtttttggagaaaagatt
cgaacgcgagccatctctgccaaagcaatgacgatggtgagcccgctgcagttgctgctc
tttgcctccaagaaggccctgtcggatggggagctcgttctggtggacgactggatcaag
ctgaagatgccccacaacgcagccgcctgcatcactgctctgcgtgcggcgatggaggct
ctcgtcgtggaagtgacgaaagagccctcgacagttcggcagctggacccggcgaatgag
cagatgctgaatgtgatccgtcagatctccaggctggcagccgcgggcatcagcctgatg
gctcccaacgcaaggttcggcgacggtcctcgcccccccaaaatggctcgctacgacgct
ggcgtgtttacccacggcaagctgatacggcgctag
DBGET
integrated database retrieval system
