Opisthocomus hoazin (hoatzin): 104337928
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Entry
104337928 CDS
T08436
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04622
RIG-I-like receptor signaling pathway
oha04623
Cytosolic DNA-sensing pathway
oha05164
Influenza A
oha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104337928 (DDX58)
04623 Cytosolic DNA-sensing pathway
104337928 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104337928 (DDX58)
05168 Herpes simplex virus 1 infection
104337928 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oha04054
]
104337928 (DDX58)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104337928 (DDX58)
Pattern recognition receptors [BR:
oha04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104337928 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
CARD_2
Helicase_C
AAA_19
AAA_25
AAA_22
Motif
Other DBs
NCBI-GeneID:
104337928
NCBI-ProteinID:
XP_009942225
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MLEVDPVALMPYINMCLIERECDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLA
LDNTGYYTASELWDMREGNGKDVDGEMTDGSENSFETMITFSEEAQCDNNLGENPCSPSE
GIYQSSHVCEPKKPRSYQSELAQPAVSGKNTLICAPTGSGKTFVALMICEHHFQNVPAER
KAKVVFLATKVPVYEQQRTVFKQHFERSGYSVQGISGETVANVCVEKVIQDSDIIVLTPQ
ILVNSIEEGILSSLSIFTLMIFDECHNTTGNHPYKVLMTRYLEQKFDSSANQLPQIVGLT
ASVGVGNAKSINETIEHVCTLCSYLDIQAISTVRENKEELQRFGNKPETYVRWVKMRAQN
HFADIISGLMSETELLMRKIYSVDTISQINKKDFGTQQYEHWIVATQKKCRLLQLADKEK
ESSICRHLFVCTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKQLTAKF
EEKEPELTALSKDESNGNPKLEELACILDEAYRYNPQTRTLLFAKTRALVAALKKWIESN
PLLSHIKPDVLMGRGTRDQITGMTLPMQKGVLDAFRTNTDSRLLIATSVADEGIDISACN
LVVLYEYFGNVIKMIQVRGRGRAKDSKCILVTSKTEVVESERHNRYKEEMMNEAIEKLQN
WDESTFARKVHDLQMKEKILRDYRKNETRPKIVQGKKNLLCGKCKAYACSTDDIRVIKES
HHIVLGDAFKERYITKLHTKKAQFDCFVKKSKMHCQNTNCQHDWGIIVKYKTFDNLPVIK
IKSFVVENVDTGTQMDFQKWRNINFSLKNFDVEETSS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgctagaagttgatccagtagcactcatgccctatataaacatgtgcctgatagaaagg
gagtgtgatgagatcctgcagattagtgaatacagaagcaaagcagctggcataactaaa
ctcatcgaatgcctctgtcggtcggataaggaaaactggccgaaaagccttcagctggca
ctagataacacaggatattacactgctagtgaactgtgggacatgagagaaggtaatggc
aaagatgttgatggtgaaatgacagatggctctgagaacagctttgaaacgatgataacg
ttttctgaagaagcccaatgtgataacaatctcggtgaaaatccctgttcaccttcagaa
gggatctatcagtcttcacatgtttgtgaaccaaagaagcctaggagctaccagtctgaa
cttgcgcagcctgctgtcagtgggaaaaacacactgatctgtgctcccacaggatctgga
aaaacttttgtggcacttatgatttgtgaacatcatttccaaaacgtgcctgcagaacgg
aaggcgaaagttgtctttcttgcaactaaagtgccagtgtacgaacaacagagaactgta
ttcaagcagcattttgaaagaagcggatattctgttcaaggaattagtggtgaaacagtt
gcaaatgtctgtgtagaaaaggttatacaggacagtgacatcattgtgctgacaccccag
attcttgtgaatagcatcgaggaagggatccttagctctctctccatcttcactctgatg
atatttgatgagtgccacaacactactggaaaccacccttacaaggtgttaatgaccaga
tacctggaacaaaaatttgactcctctgcaaaccagctgcctcagattgtaggtttaact
gcttctgttggcgttggtaatgccaagagcatcaatgaaacgatagagcatgtctgtacc
ctctgctcctaccttgacatacaggccatatccactgtcagagagaacaaagaggaactg
cagagattcggaaacaagccagaaacttatgtcagatgggttaaaatgcgagctcagaat
cactttgcagacataatctcaggtctgatgtctgagacagagttgttgatgaggaagatt
tactcagtggatactatctctcaaatcaacaagaaggattttggaacacagcaatatgaa
cactggatagttgccactcagaagaaatgcagactgttgcaactggcagataaggagaag
gagagcagcatttgtagacaccttttcgtttgcactgaacacctgcggaagttcaacgat
gctctcatcatcagtgaagatgcccgcatcgaagatgctttagcctacctaactgaattt
ttcacaaatgtcaaaaatgggccatatacagagttagagaagcaactgacagccaaattt
gaagagaaagaaccagaactgactgccctttcaaaagatgaatcaaacggcaatcccaag
ctggaggagcttgcttgcatcctggatgaagcatatcgctataacccacagactcgcact
cttctctttgctaagacaagagccttagtagctgctttgaagaagtggatagaatcaaac
cctctacttagccatataaagccagatgtgctgatgggtcgtggaacaagagatcaaata
acaggtatgaccctgccaatgcagaagggtgtactggatgcattcagaaccaacacagac
agcagactgctaattgctacatctgttgctgacgaaggcattgatatttctgcatgtaac
cttgttgtgctctatgaatacttcggtaatgtcatcaaaatgatccaagtcagaggtcgt
ggaagggcaaaagacagcaagtgcatccttgtgacaagcaaaacagaagtggttgagagt
gagagacataaccgttataaggaagaaatgatgaatgaagctattgaaaagctacagaat
tgggatgaatcaacatttgcaagaaaggtacatgacctgcaaatgaaggaaaagatatta
cgagattacaggaagaatgaaaccagacctaagatagtgcaagggaagaaaaaccttctg
tgtggaaaatgcaaggcatatgcctgcagtacagatgacatcagagttataaaggaatct
catcacatcgtcctaggagacgcattcaaggaacgttacataacaaagctgcacacgaag
aaagcccagtttgattgttttgtgaaaaaaagcaagatgcactgccaaaatactaattgc
cagcatgactggggaatcatagtgaagtacaagacattcgataatctaccagtgatcaaa
atcaaaagctttgtagttgagaacgttgacacggggacacaaatggattttcagaaatgg
agaaatattaatttttctttgaagaattttgatgttgaagaaacatccagctga
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