Owenweeksia hongkongensis: Oweho_0750
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Entry
Oweho_0750 CDS
T01677
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
oho
Owenweeksia hongkongensis
Pathway
oho03030
DNA replication
oho03410
Base excision repair
oho03420
Nucleotide excision repair
oho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Oweho_0750
03410 Base excision repair
Oweho_0750
03420 Nucleotide excision repair
Oweho_0750
03430 Mismatch repair
Oweho_0750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oho03032
]
Oweho_0750
03400 DNA repair and recombination proteins [BR:
oho03400
]
Oweho_0750
Enzymes [BR:
oho01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Oweho_0750
DNA replication proteins [BR:
oho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Oweho_0750
DNA repair and recombination proteins [BR:
oho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Oweho_0750
NER (nucleotide excision repair)
GGR (global genome repair) factors
Oweho_0750
MMR (mismatch excision repair)
DNA ligase
Oweho_0750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Oweho_0750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
BRCT_2
PTCB-BRCT
Auto_anti-p27
HHH
Motif
Other DBs
NCBI-ProteinID:
AEV31763
UniProt:
G8R1M4
LinkDB
All DBs
Position
complement(801672..803687)
Genome browser
AA seq
671 aa
AA seq
DB search
MTKEEAKSQIEELSKELMHHNHQYYVLDNPEISDYDFDQKLKQLQKLEEAFPEFKLSTSP
TQRVGGDVTKNFETVPHKTRMLSLANTYSKEELEDFIKRIGKSISDPVEFVCELKYDGAA
IGITYKNGILTRALTRGDGTQGDDITANVRTIRSIPLQLHGNDFPEELEIRGEIFMLLEG
FAKLNQQRIEDGEEPFANPRNTASGTLKMQDSSIVASRSLDCFLYYILTDDRMFDNHFES
MQKAAQWGFKVPSAEKNYIAKAKNVDEIFDFINYWEEHRHELPFEIDGIVVKVNDYAQQD
KLGFTAKSPRWAISYKYKAEQVSTKLNSITYQVGRTGAITPVANLEPVQLAGTTVKRASL
HNADQIEKLDLRVGDHVYVEKGGEIIPKVIGVDFDQRPPDLEPVKYATHCPECNTELIRK
EGEAQHYCPNDDGCPPQIKGRIQHFISRKAMDIEGMGGETVDQFVNEGLISNYADLYTLQ
KEQLLPLERMAEKSAQNIIEGIEASKSIPFERVLFGLGIRYVGETVAKKLARHFANIDTL
MAASLEELTNVDEIGSRIAESVTTFFSDPAKVGTVERMKLAGLQFEVVQQEGESTKLDGK
TIVISGNFERYSRKEIKELIEKHGGKNTGSVSGKTDLIVAGEGMGPSKRKKAEDLGVKII
DENEFAELIGD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaggaagctaaatcgcaaatagaggagctcagcaaggagctgatgcatcac
aatcatcagtattatgtgctggataacccggagatttcggattatgattttgatcaaaaa
ctgaagcagctacaaaagctggaagaggcttttccggagtttaagttgagcacttcgccc
acacagcgtgtaggtggtgatgttaccaaaaactttgaaaccgtgccgcataaaacgcgg
atgctttctttggcgaatacctatagcaaagaggaactcgaagattttatcaagcgaatt
ggaaagtcaatttccgaccccgtggagtttgtttgtgaacttaagtatgatggagcggct
attggcatcacctacaaaaatggaattttgactcgagcccttacccgtggggatggcact
caaggtgatgatatcacagctaatgtgcgcaccattcgttccattcctttgcagcttcat
ggcaatgattttcctgaggaattggaaatacgtggtgagatatttatgcttttggaaggc
tttgcaaagctcaaccagcagcgtattgaagatggagaagaaccttttgccaatccacga
aatacagcttccggaactttgaaaatgcaggatagtagcattgtagcttctcgctcatta
gattgctttctgtactacattcttaccgatgaccgcatgtttgacaatcactttgagagc
atgcaaaaggccgctcagtggggttttaaagtgccaagtgcagaaaaaaactatatcgct
aaggcgaagaatgttgatgagatttttgatttcatcaattattgggaagagcaccgtcac
gaattaccatttgagattgatggaatagtagtaaaagtgaatgactatgcacagcaagac
aagcttggctttacggccaaatctccgcgctgggcgatttcatataagtataaggccgag
caggtttccaccaaattaaacagcattacttaccaggttgggcgtacgggagcgattact
ccggtggcaaatttggaacccgtgcaattggccggaactaccgtaaagcgtgcttcgctg
cacaatgccgatcagatagagaagttggatttgcgtgtgggcgaccatgtgtatgtagaa
aaaggcggggagataattccaaaagtgataggtgtagattttgatcagcgcccgccagat
ttggagcctgtaaaatatgccacgcattgccctgaatgtaacacagaacttatccgcaag
gaaggggaagcacaacattattgcccaaatgatgatggatgtccaccgcagataaaggga
cgtattcagcattttattagccgtaaggccatggacattgaagggatgggcggtgaaacc
gtagatcagtttgtaaacgaaggattgattagcaattatgcagatttatacacattgcaa
aaagagcagcttttgcctttggagcgcatggcagaaaagtctgcacaaaatataattgaa
ggaatagaggcaagtaagtcgattccatttgagcgagttttgtttggattaggaatacga
tatgttggcgaaacggtggccaaaaagctggcgcgtcattttgcaaatattgatactttg
atggctgcaagccttgaagaattgaccaacgttgatgaaataggatcgcgtatcgcagaa
agcgtaacgacatttttttcagacccagcaaaggttggcacggtagagcgcatgaaattg
gctggacttcagtttgaagtggtacagcaggagggagaatctacaaagctggatggaaag
acaattgtaatctccggaaactttgaaagatattcccgtaaagaaataaaagagctgata
gaaaagcatggcggaaagaatacgggttccgtttctggtaaaactgatttgatagtagcc
ggagaaggaatgggcccttccaaacgtaaaaaggctgaagaccttggcgtaaaaattatt
gatgaaaatgaatttgctgaactgataggcgactaa
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