Oxyura jamaicensis (ruddy duck): 118161630
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Entry
118161630 CDS
T11549
Symbol
HACD1
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja00062
Fatty acid elongation
oja01040
Biosynthesis of unsaturated fatty acids
oja01100
Metabolic pathways
oja01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
118161630 (HACD1)
01040 Biosynthesis of unsaturated fatty acids
118161630 (HACD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oja01004
]
118161630 (HACD1)
Enzymes [BR:
oja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
118161630 (HACD1)
Lipid biosynthesis proteins [BR:
oja01004
]
Fatty acid synthase
Component type
118161630 (HACD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
118161630
NCBI-ProteinID:
XP_035173072
LinkDB
All DBs
Position
2:join(21351115..21351242,21355321..21355438,21356513..21356531,21356612..21356700,21359304..21359425,21361685..21361863,21363342..21363424)
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AA seq
245 aa
AA seq
DB search
MASSEEDGGGNGSVEEKENGKKRSLGALATAWLIFYNVAMTAGWLVLGIAMVRFYIQKGT
HRGLFRSVQKTLKFFQTFALLEVVHCAVGIVRTSVLVTGVQVSSRIFMVWFIAHSIKQIQ
NEESVILFLVVWTVTEITRYSFYTFNLLNHLPYFIKWARYNFFIILYPAGVAGELLTIYA
ALPYVKKTGMFSLRLPNKYNVSFDYYYFLIIVMFSYIPLFPQLYFHMLRQRRKVLHGEVI
VEKDD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcgaggaggacggaggcggcaacggctcggtggaggagaaggagaacggc
aagaagaggagcctgggcgccctggccacggcctggctcatcttctacaacgtcgccatg
accgcggggtggctggtattgggtattgccatggtgcgattttatatacagaaaggaaca
cacagaggcttattcagaagcgtgcaaaagacacttaaatttttccagacatttgctttg
cttgaggtagtccactgtgcagttggaatagttcgcacatctgtgcttgtgacgggggtc
caagtgagttcaagaatcttcatggtgtggttcattgcacatagtataaaacagatccag
aatgaggagagcgttattctttttctggtcgtatggactgtgacagagattactcgatat
tccttctacacattcaacctgctcaaccatttgccatacttcattaaatgggccagatac
aacttttttataattttgtatcctgctggagttgctggtgaactactgactatatatgct
gctttaccctatgtgaagaaaacaggaatgttttcattgagacttcccaacaagtacaat
gtctcctttgactactattacttccttattattgtcatgttctcctatataccattattt
ccacaactctacttccacatgctgcggcagagaagaaaggtgcttcatggagaagtgatt
gtagaaaaggatgattga
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