Oxyura jamaicensis (ruddy duck): 118168447
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Entry
118168447 CDS
T11549
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03320
PPAR signaling pathway
oja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118168447 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118168447 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118168447 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oja03310
]
118168447 (NR1H3)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118168447 (NR1H3)
Nuclear receptors [BR:
oja03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
118168447 (NR1H3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
118168447
NCBI-ProteinID:
XP_035184728
LinkDB
All DBs
Position
5:join(2168827..2168944,2171930..2172196,2175064..2175272,2175513..2175692,2176065..2176164,2178575..2178688,2179497..2179591,2179976..2180122)
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AA seq
409 aa
AA seq
DB search
MGPTQLSTQDHGKRVASVFEMEEEGLSLFSGSENPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPPHPPSPSHKLTPEQLSMIEKLV
AAQQQCNQRSFTDRLKVTPWPQVPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDHLMFPRMLMKLVSLRTLSNVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccactcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggctttcactcttctctggctcagagaacccccctgagcatgcagaa
aatccccccttgaagcggaagaagggcccagccccaaagatgctgggaaatgaagtgtgc
agcgtgtgtggcgacaaggcctcaggcttccactacaacgtgctgagctgcgaaggctgc
aagggcttcttccgccgcagtgtcatcaagggtgcccagtatgtctgcaagaacggcggc
aagtgtgagatggacatgtatatgcgccgcaagtgccaggagtgccggctgcgcaagtgc
caggaggcgggcatgcgggagcagtatgttctgtctgaagagcaaatccggctgaagaag
ctgaagaaacaggaggacgatcaggctcggacagtcgtggtgcgtccaaaccctccacat
ccaccaagcccttcccacaaactgacgcctgaacagttaagcatgatagaaaagctcgtg
gccgctcagcagcagtgcaaccagcgctcgttcacagacaggctcaaagtgacgccatgg
ccccaagttcctgaccctaataaccgtgaagcgaggcagcagcgttttgctcactttaca
gaacttgcaattatctctgtgcaagagattgtggactttgccaagcaattgcccggcttc
ctggagctcaccagggaagatcagatcgctttattgaagacatctaccatagaggtgatg
ttattggagacatctcgacgctacaatccggagattgagagcatcacttttcttaaggac
ctgagctataatcgggatgacttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgaattctcaaagggaatgaatgagctgcaactcaacgacgctgaatatgcactt
ttaatcgccatcaacattttctctgcagaccgaccgaatgtgcaggaccagtccctggtg
gagagactgcagcacacctatgtggaagcccttcattcttacatttgcatcaacagacca
aatgaccacctgatgtttccacggatgttaatgaagctggtcagtcttcggacactaagt
aacgtccactctgaacaggtgtttgcccttcggctgcaggacaagaaactccctcccctg
ctctcagaaatctgggatgtgcatgagtga
DBGET
integrated database retrieval system
