Oxyura jamaicensis (ruddy duck): 118171814
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Entry
118171814 CDS
T11549
Symbol
CLRN1
Name
(RefSeq) clarin-1 isoform X1
KO
K23841
clarin
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oja03037
]
118171814 (CLRN1)
Cilium and associated proteins [BR:
oja03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118171814 (CLRN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clarin-2
LPG_synthase_TM
PsbN
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
118171814
NCBI-ProteinID:
XP_035191122
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All DBs
Position
9:25427284..25435207
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AA seq
232 aa
AA seq
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MPAQQKKIIFCIAGVFSFACALGTAAAIGTQLWIRGTILCKTGALLVNATGKELEKFIGE
IQYGLFYGERVRQCGLGGRPFQFSFFPDLLKIIPASIHVSIILFCTLLIIFALVGTGFFM
YNAFGSPYETLHGPVGLYLWTFIACSCSCLILILFSSEVKIHHLSEKIANFKEGSFTFKT
HSEQFADSFWIILGCSLVHFMNALLIRFAGFQFPFSKSKDSATTTGAVDLMY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagcagaagaaaatcatcttctgcatagctggggtgttcagcttcgcttgt
gccctgggaactgcagcagccatcggcactcagctgtggattagaggaacgatcctctgc
aagaccggagccctgctcgtcaacgccaccgggaaggagctggagaagttcatcggggaa
atccagtacgggcttttctatggcgagcgagtgagacagtgtgggctcggggggagacct
tttcagttttcattttttccagatctgctcaaaatcatccctgcaagtatccatgtgagc
atcattctcttctgcacactgctgatcatctttgccctggtgggaacaggtttcttcatg
tacaatgcttttggcagcccctatgaaaccctgcatggccctgtagggttgtacctctgg
acctttattgcatgttcctgcagttgtctcatcctgattctcttctcctcagaggtgaag
atccaccacctttcagaaaaaattgctaattttaaagagggaagttttacatttaaaact
cacagtgaacagtttgcagattccttctggatcatcctaggctgctccttggtgcacttc
atgaacgccctcttgattcgctttgctggatttcagtttcctttttcaaaatcaaaggat
tcagcgacaaccactggagcagtcgacctgatgtattag
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