KEGG T11549: 118173104

Oxyura jamaicensis (ruddy duck): 118173104

Entry

118173104         CDS       T11549

Symbol

IARS1

Name

(RefSeq) isoleucine--tRNA ligase, cytoplasmic

K01870

isoleucyl-tRNA synthetase [EC:6.1.1.5]

Organism

oja Oxyura jamaicensis (ruddy duck)

Pathway

oja00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:oja00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    118173104 (IARS1)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:oja01007]
    118173104 (IARS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oja03016]
    118173104 (IARS1)
Enzymes [BR:oja01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     118173104 (IARS1)
Amino acid related enzymes [BR:oja01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   118173104 (IARS1)
Transfer RNA biogenesis [BR:oja03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    118173104 (IARS1)
Prokaryotic type
   Other AARSs
    118173104 (IARS1)

SSDB

Motif

Pfam:

tRNA-synt_1 Ubiquitin_IARS1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e Plectin_PPL

Other DBs

NCBI-GeneID:

118173104

NCBI-ProteinID:

XP_035193246

LinkDB

Position

12:complement(join(5729266..5729348,5734821..5734973,5735964..5736107,5741235..5741360,5742194..5742305,5745394..5745570,5747226..5747321,5747574..5747686,5748461..5748635,5756367..5756450,5756651..5756753,5759807..5759928,5760374..5760451,5760860..5760951,5766047..5766167,5769025..5769172,5773218..5773301,5773873..5773959,5777518..5777712,5778064..5778137,5783217..5783343,5792879..5792977,5797457..5797548,5798622..5798744,5803197..5803292,5804760..5804820,5808800..5808887,5809530..5809677,5812367..5812484,5819929..5820011,5823182..5823301,5823753..5823909,5824410..5824528))

AA seq 1265 aa
MVQQVPENITFPNEEEKILELWKNLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNHC
RGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDASVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDNATGKIYILMESRLIALYKSDTEYEILERFPGVMLKGKKYKPLFEYFIQCK
DKGAFTVLVDSYVKEEEGTGVVHQAPYFGADDYRVCVDFNIIQKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGVLHRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMAVVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILEHKEEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIRALETLFSVLYSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHRDPEALENISSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHM
VLGKRLKGAFKLVMAAIKELKSEQLEEFQETGTIVVEGHELHEEDLRLMYTFDQAAGGSA
QFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSYPEG
DYLDTVIKEHTDFILATIKAALKPYPVPTSKEVLIQETTQLKGSELQITLVRGGACQCVG
PACAYVNLKVCANGTEQDGVLLLENPKGDNTLNFTGLVDAISCIFGLKNSKLTVFNGKTE
LINKTDLLTLSGKTLHVTTGSAPALTNSPDALLCQYINLQLVNAKPQECQKGTMGTLLME
NPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTQEITKDVSMKNLNMKTVYVRVIP
TTAEC

NT seq 3798 nt +upstreamnt +downstreamnt
atggttcaacaagttccagaaaacataactttcccaaatgaggaagagaagatactggag
ctctggaaaaatctgaattgtttccaggaatgcctaaagcagtcgaagaatagacccagg
tttaacttctatgatggccctccatttgctactgggctaccacactatggccatattctt
gcaggaaccattaaagacatagtaaccagattcgctcatcagagtgggtttcatgttgac
agaagatttggctgggattgccatggcttacctgtggaatatgagattgacaagacctta
ggtatcaaagggccagaagatgtggcaaagatgggcattgcagaatacaacaaccattgc
agaggaattgtgatgagatactcgaaggaatgggagttcaatgtaaccagattaggacgc
tggattgattttgaaaatgactataaaactctttatcctgagttcatggagtctgtgtgg
tgggttttcaagcagctgtatgacaaaggactagtatataggggtgttaaggtcatgcct
ttctcaactgcatgcaacaccccactgtccaacttcgagtcccatcagaattacaaggat
gttcaagacccttcagtgattgtgagcttcccactggatgaagatgcaagtgtctctctt
gttgcttggaccactactccttggaccttacctagtaatctagccctttgcgttaaccca
gaattgcaatacgtaaaattgagagataatgccacaggaaagatttacatcttgatggaa
tccaggcttatagccctatacaaatctgacacagaatatgagatactggagaggtttcct
ggtgttatgcttaaaggcaaaaaatataaaccactctttgaatatttcattcagtgcaaa
gataaaggtgcctttactgtgttagtagatagctatgtgaaggaggaggaaggcacaggt
gttgtccatcaggccccctattttggtgctgatgattacagagtctgtgtggattttaat
ataattcagaaagattcagtgccagtttgtcctgttgatgcatcaggctgcttcacagct
gaagtgactgactttgctggacagtatgtgaaggatgcagataagaacatcattaaatta
ctgaaggagaaaggcagactggttcacagcagtagttataaacacagctatcctttctgc
tggaggtcagatactccattaatatacaaagctgtgccgagctggtttgtaagagtagag
cacatggtggagaagctactggagaataacgcacagtgttactgggttccagattttgtg
agggagaagcgttttgggaactggcttaaagatgcacgagattgggctatatctagaaac
cggtactggggaacgcccatcccgttgtgggtcagtgatgattttgaagaggtcgtttgc
attggttcaatggcagaattggaagagctgtcaggagtgaaagtcacggatctccatcga
gaaagtattgatcacctaacaatcccttcacgctgtggaaagggcgtattgcaccgggtc
cctgaagtttttgattgctggtttgagagcggaagtatgccttatgcacaagtgcattat
ccatttgaaaacaagaaagaacttgaggacgctttccccgctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacactttgctggtgctgtccactgctctttttgga
aggcctcctttcaagaatgtaattgtaaacggcctagttcttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattatccggatccaatggctgttgtaaatagttatggagct
gatgcactaagattataccttatcaattctcctgtggtaagagcagaaaatttgagattt
aaggaagaaggagtgagggatatactgaaggatgtcttcctgccctggtacaacgcatac
cgctttcttgttcagaatgttcagatcctggaacataaggaggagggaagagaattcctt
tacaatgagaacacagttaaggagagcaataacatcatggataaatggattctttctttc
acccaatcgctcatacagttcttcaaagctgaaatggcagcttacaggctgtataccgta
gtccctcgattagtgaagtttgtagatattctgaccaactggtatgttagaatgaatcgc
agaagactaaagggtgagaacgggaccgaagactgcattagggccctggaaaccttgttc
agtgttttgtactccatgtgcagacttatggcaccgtatactccattcatcactgaactg
atgtaccagaacctgaagacgcttattgatccagcctctgtacaggaaaagaatactgaa
agcatccactacctcatgcttcctcaagtgagggaggatctgatcgacaaaaaaattgaa
agtgcagtttcttgtttgcagtctgttattgagctgggacgagtaatcagagacagaaaa
accattccagtaaagtatcctctgaaagaagtagttgttatccatcgggatccagaggct
ctggaaaacatcagctctctggagaagtacatacttgaggagcttaacgtacgtcaagtg
acattatctactaacaaagataaatacggagtccggctgagagcagaaccagatcacatg
gtgcttgggaagcgcctgaaaggtgcatttaaacttgtcatggctgcaatcaaagagctg
aagagtgagcagctggaggaattccaggagacaggcaccatagttgtagaaggacatgaa
cttcatgaggaagatcttcgtctcatgtatacctttgatcaggctgcgggaggatctgcc
cagtttgaggcacattctgatgctcaggttttagttctgctagatgttaccccagaccag
tccatggtggatgaaggagttgcccgggaagtgattaaccgcattcagaagcttcgcaaa
aagcgaaatctggttcctacagatgagattacagtgtactacagatcatatccagaaggt
gactacttggatactgttattaaggaacatacagatttcattcttgcaacaataaaagct
gccctaaaaccttacccggtgcctacctcaaaagaagttctcatccaggagaccacccaa
ctgaagggatcagagctacaaatcacacttgtcagaggtggtgcgtgccagtgtgttggt
ccagcctgtgcctacgtcaacctcaaagtttgtgctaatgggacagagcaagatggtgtg
ttgctgctggaaaatccaaaaggagataataccttgaacttcactggacttgtagatgcc
atctcctgcatttttggtcttaaaaattcaaaactgacagtttttaatggaaaaacagaa
ctgataaataaaactgacttgcttactctcagtggaaagactctacatgtgacgacaggg
tcagcacctgctctgaccaactctcctgatgctcttctctgccagtatatcaacttgcag
ttagtaaatgcaaagccacaagaatgtcagaaaggaacaatgggaactcttctaatggaa
aaccctgttggtcagaatggattaacgtaccaaggtctcctacacgaaacagcaaaagtt
tttgggctgagaagcaggaggctaaaattgttcctggatgaagcacaaactcaggagatc
acaaaggacgtctccatgaagaacctgaacatgaagactgtgtatgttcgtgttataccc
accacagctgaatgttga

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