Oxyura jamaicensis (ruddy duck): 118176015
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Entry
118176015 CDS
T11549
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja00514
Other types of O-glycan biosynthesis
oja04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118176015 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118176015 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oja01003
]
118176015 (RFNG)
Enzymes [BR:
oja01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118176015 (RFNG)
Glycosyltransferases [BR:
oja01003
]
Glycan extension
O-Glycan
118176015 (RFNG)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118176015
NCBI-ProteinID:
XP_035198617
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All DBs
Position
18:complement(join(12413915..12413981,12414202..12414287,12415643..12415808,12415895..12415983,12416983..12417136,12417492..12417594,12418111..12418159,12419012..>12419167))
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AA seq
289 aa
AA seq
DB search
PARQGRLGPSSGSVKESLELKDIFIAVKTTRKYHKTRLDLLFQTWISQARGQTFIFTDWE
DQELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLL
RLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTSVKFWFATGGAGFCISRGLALKMS
PWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLRGESVLQQV
TLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPTKKMF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
cccgcgcggcagggccgcctcgggccttccagtggctcggtcaaggagagcctggagctg
aaggacatctttatcgcggtgaagacgacgaggaagtatcacaaaacgcgcctggacttg
cttttccaaacctggatctcccaggcgagaggacagacatttatattcacagactgggag
gatcaggagctacgcctgaaagcaggggatcatatgatcaacaccaactgttcagctgtc
cacacgcgtcaagctctctgttgcaagatgtctgtggaatatgataaattcctagaatct
gggcaaaaatggttttgccatgtggatgatgacaactatgtgaacccacgtactctcctg
cgtctcttatctgccttctcacacagccaggatgtctatgtggggcgaccaagtctggac
catcccattgaagcagctgaccatgtccaaagtgatggatcaaagacaagcgtgaaattc
tggtttgccacaggtggagcagggttctgcatcagcagaggtcttgctctgaagatgagt
ccctgggccagcctgggtaacttcatcagtactgcagaaagagtgcgtcttcctgatgat
tgcacgattggctacatcattgaagggctgctggaggtaaagttgctgcacagcccattg
ttccattcccatctggaaaatctgcagagactgcgaggcgagtctgtgctgcaacaggta
accctaagttatggagaccctgagaacaaacacaatgttgtaagtgtgggaggagtgttt
gggcttcagcaagatccaacccggtttaaatctgtccattgtcttctgtatcctgacact
atctggtgccctactaagaagatgttctaa
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