Oceanobacillus jeddahense: NP439_12985
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Entry
NP439_12985 CDS
T08779
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ojd
Oceanobacillus jeddahense
Pathway
ojd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ojd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NP439_12985 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ojd03400
]
NP439_12985 (nth)
Enzymes [BR:
ojd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NP439_12985 (nth)
DNA repair and recombination proteins [BR:
ojd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NP439_12985 (nth)
Prokaryotic type
NP439_12985 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF3189
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UUI00993
LinkDB
All DBs
Position
2651362..2652012
Genome browser
AA seq
216 aa
AA seq
DB search
MLNNTQIRQCLDTMAEMFPDAEGELVHSNPFELVIAVLLSAQCTDKLVNKVTADLFKKYK
TPEDYLAVPLEEVENDIRSIGLYRSKAKNIQKLCRTLIDNYNGEVPQTKEELVKLAGVGR
KTANVVASIAFNEPSIAVDTHVERVSKRLGICRWKDSVVEVENTLMRKVPREEWSVTHHR
MIFFGRYHCKARNPNCPECPLLELCREGKKRMKKIG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataatacacaaattagacaatgtttagataccatggcagaaatgtttccggat
gcagaaggagagcttgtccattccaatccatttgaattagtaattgctgttttgctttct
gctcagtgtacagacaaattagtgaataaagtaacggcagatttatttaaaaaatataaa
acaccagaggattacctcgctgttccattagaagaagtagaaaatgatattcgttcaatt
ggcttataccggtctaaggcaaaaaatattcaaaagctatgccgtacattaattgataac
tataacggagaagtcccgcaaacgaaagaagaactggttaagctagctggtgtcggcaga
aaaacagccaatgtagttgcttcgattgcttttaatgaaccatccatagccgttgataca
catgtggaacgcgtatcgaaacgtttaggtatttgcaggtggaaagatagtgttgtcgaa
gtagaaaatacattgatgcgaaaggtcccaagggaggaatggagtgttacacatcatcga
atgatcttctttggacgctatcattgtaaagctagaaacccaaattgtccggaatgtcca
ttattggaactttgtcgtgagggtaaaaaacggatgaagaaaataggctga
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