Oncorhynchus keta (chum salmon): 118357526
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Entry
118357526 CDS
T09424
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03320
PPAR signaling pathway
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118357526
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118357526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118357526
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118357526
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118357526
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
118357526
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
118357526
NCBI-ProteinID:
XP_035590617
LinkDB
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Position
2:59222162..59241237
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AA seq
439 aa
AA seq
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MKHEGNLLPLEPPHHAGFSSPPRKGPSSLAEKSSPLLMEPSNIKADPAGDMPANTECQPV
KRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEM
DMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRGKKMKKNEEETARTSAVVTPTPVPEVV
PLEPEQLEMIEKLVAMQKQCNKRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMS
VQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKE
DFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFSAGQRSSGMLVWNRAHMQD
RPNVLDHELVERLQQPYVNALRSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFAL
RLQDKKLPPLLSEIWDVHE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgagggcaacctccttcccctggaaccaccccaccatgcagggttttccagt
cccccccggaaagggccttcctcactagctgagaagagcagcccgctgctcatggagccc
agcaacatcaaggctgaccccgctggcgacatgcctgccaacacagagtgtcagccggtg
aagaggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggg
gacaaggcctcgggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtcatcaagagcgcccagtactcgtgcaagaacaacggccgctgtgagatg
gacatgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggc
atgctggagcaatgcgttctctcagaggagcagatccgagggaagaaaatgaagaagaac
gaggaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaggtggtc
ccgctggagcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgc
aacaagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccc
cagaacagggaagtacggcagcagcgctttgcccacttcaccgagctggccatcatgtcg
gtccaggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagag
gaccagattgccctgctgaagacctcaaccattgagatcatgctgctggaaacatcacgg
agatataaccctgccattgaaagcatcacgttcctgaaggacttcagttataacaaggag
gattttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttctccaag
ggcatgaatgacctgcatctggatgaggcggagtacgctctgctcatcgccatcaacatc
ttctctgcaggtcagaggtcaagtggtatgctagtgtggaacagagctcatatgcaagac
cggcccaatgtgctggaccatgaactggtggagcgactacagcagccgtatgtgaacgca
cttcgttcttacatcatgataaagagaccaaacgatcatctgatgtttccacgcatgctc
atgaagctggtcagcctccgcaccctcagcagcgtccactctgagcaggtcttcgccctg
cgcctccaggacaagaagctcccgccgctgctatctgaaatctgggacgtccacgagtga
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