Oncorhynchus keta (chum salmon): 118357607
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Entry
118357607 CDS
T09424
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04140
Autophagy - animal
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118357607
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118357607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118357607
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118357607
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118357607
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
118357607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
118357607
NCBI-ProteinID:
XP_035590785
LinkDB
All DBs
Position
24:complement(45231610..45257863)
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AA seq
1063 aa
AA seq
DB search
MLATQTPDTGPELEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKSGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTEVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAYYQPSALLLDPEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPATQADAVDLPSLTKHKDSWDTMSLSSGGSDTVEVQHVG
AGVLGRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDPKSPDKDPWPCELEISARLE
NDVNAKGPLKDDLAEFRESATFSQDSMHEDLYVSTPGADHLSENTASSGSDGEAQGPFTP
LTGSSNPASVGSDQEEPSTKTHVPSEVYSHTEVPSSHSDCVERTAITPHLPVTETPKEKK
TDDSAKSTTEPSAHTNLCLTTSVHSRRMSTDSITHSHSWISEDDIYKPHLEELVDPDESL
LGSGPACVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGLWRDY
YCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLHLRAANHDEA
EDWVDRIAEAVSMCRPLHLLDDHSEVLQPIDSFVILEEPPKSSPSSPSVPTSPEQGGTVV
EQEQQPPLELDWRRPTDPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNGFRVQDGR
KVLCCSHPIEGIRDVVPDVSLGGPAFFRVVTTGDTLKLRAKSPEEARAWRCLIRGALDSY
LESGENGEPNSPGLATGAGGNIHRLVQHRLKGGGVLLAHLYTVPTEKGLDLQGFKCAGCP
KLVGVSRGKARLCEFSGKYYCEACHQGDVITIPSRMVHNWDLTPREVSRQALELLAQVEH
EPLLNLHLLNPNLWEHVEPMAQAHSLRQRLQLVGKYLLTCRSGPCKNIQTRLGLRTYLLE
SSHLYSVMDLQQIAEGTYVAYLNMLILFASNHVQQCDLCTQRGYICQICHASDIIFPFQF
DTTVRCKECKAMFHATCKAESSSCPRCLRIQRYLESDLQDCSV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagacaccagatactgggccagagttggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctacgtgatgactgatgcc
gtggtaaccagcgaggatggtgacgccaatctgctgtgctcttctctggaggccgtcttt
atccatggcatcaagagcaaatatgtccgctccaagtccggaggacatggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagccttctcaaaacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggaggtgggtcgctgc
cgggcttggctacggctggccctcaaccacggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaacctgcaggcctactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctggtcttcaacctt
tcgtacaagtcagccgtgctcaatgagtggaccaccaccccactggctctggccggcctc
tgccccgccacccaggccgacgctgtcgaccttcccagtctcaccaaacacaaggattct
tgggatacgatgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgtgggg
gcaggggtgctagggagggtgattggtggagtctcagggggtaggacccctctgaattct
tcaaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcggac
cccaagagcccagacaaggatccctggccatgtgaactggagatctctgccagactggag
aacgatgtcaatgccaaggggcctcttaaagatgatctggcagagttcagggagagtgcc
accttcagtcaggactccatgcacgaggatttgtatgtttccactccgggtgcagatcac
ctctcagagaatacggcctccagtggctctgacggcgaggcccaggggccattcacaccc
ctcactggctcctctaaccctgcttcagtggggtcagaccaggaggagccgtccactaag
acccatgtcccttccgaagtgtactcgcacactgaagtgccctccagtcacagtgactgt
gtggagagaacagcgataactcctcacctgcctgtcacagagacgccaaaggagaaaaag
acagacgattccgcgaagagcaccacggagccttcagcccacacaaacctatgccttact
accagtgtgcatagcaggaggatgtctacagactcaatcacacattcccactcctggatc
tctgaggatgacatctataagccacaccttgaggaactggttgaccccgatgagtcatta
ctagggtctggcccagcttgtgtgaatggattgacctctccccctccagagcctgagact
ccccagtctccccccagcgtggttcaccgcaggcagataggcctgtccaaccctttccgt
gggctgctgaagctgggccatctggagcggcggggcgctgtgggcttgtggcgggactac
tactgcgagctctcgcccttcgagttccgcctctacctgaacgcagaggagcgcacctgc
tgtgacaactgctccctgctgcgttgcgaagacgcccgcgtcacctcggccgagggccgc
ttcgacctggccttcccagggaagaggctccacctgcgggcagccaaccacgacgaggca
gaggactgggtggaccgcatcgcagaggccgtcagcatgtgccgcccgttgcacctcctt
gacgaccattcagaggtgctgcagcccattgacagctttgtcatcctggaagagccccca
aaatcttccccttcgtccccctccgtacccaccagccctgagcaagggggtactgtggtt
gagcaggagcagcagccgccacttgagctagactggaggcgtcccacagaccctgagtca
gacgccattaaggaggcggtgctgtacctatcccaggacgcagaggctcgcaactggact
cctctggtcttctccctctccttggagactctcaacggcttccgggtacaggatgggcga
aaggtgctgtgctgctcccaccccatcgaggggatacgggacgtggtcccagatgtttct
ctggggggaccggccttctttagggtcgtaacgaccggagatacgctcaagctgagggcc
aagagccctgaggaggcgcgtgcctggaggtgcctcatcaggggagccctggactcctac
ctggagagtggagagaacggggagcctaatagccctgggttagccactggggcagggggg
aacatccacagactggtgcagcatagactgaaggggggcggggtgctgctggcccatcta
tatacagtgcccacggagaagggcctggaccttcagggcttcaagtgtgcaggttgtcca
aagctggtgggggtctcccggggaaaagccagactgtgcgagttctcagggaagtactat
tgcgaagcttgtcaccaaggtgacgtcatcaccataccctcccgcatggtgcataactgg
gacctcacgcctcgcgaggtctccagacaggccctcgaactgctggctcaggttgaacat
gagcccctgctcaaccttcaccttttgaaccctaacctgtgggagcatgttgagcccatg
gcccaggcacacagtctcagacagaggctgcagctggtaggaaagtacctgctcacctgc
cgcagtgggccatgcaagaatattcagaccagactgggcctaaggacatacctgttagaa
tcaagccatctctacagtgtcatggacttacaacagatagcggagggaacatatgtggcc
tacttgaatatgttgatcctgtttgcctccaaccacgttcaacaatgtgacctttgcacc
cagaggggctacatctgccagatctgtcatgccagtgacatcatcttccccttccagttc
gacaccactgtcaggtgtaaagagtgtaaggcaatgtttcacgcaacctgcaaggccgag
tcgtcctcctgtccacgatgcctgcgtattcagaggtacctcgagagcgatctgcaggac
tgctctgtttga
DBGET
integrated database retrieval system
