Oncorhynchus keta (chum salmon): 118360277
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Entry
118360277 CDS
T09424
Name
(RefSeq) plexin-D1-like
KO
K06822
plexin D
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
118360277
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
118360277
NCBI-ProteinID:
XP_052337919
LinkDB
All DBs
Position
27:22742424..22861144
Genome browser
AA seq
1898 aa
AA seq
DB search
MPPSEKIAVLILGVLVLESPWNAHHSLASALQIQQAFTSQNQTNNFVVDEVSRKVYLATV
NMVYQLNGTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQGVL
VVCGSVYQGFCELRKMENISEIAVEFPPHGEKTVFPSMLNIAANHPNASTVGLIFRSHGG
NTRLLVGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSEDNV
FKIKQEVKQKNKLNFVHAFIQKSYAYIAINNDANMGHKQSQPNSILARICLDTENTRKST
SESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGSGEGLESHLFGVFTKSDRKSAL
CAFRFSDIEEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGAAH
LQHPLALRRPLRATPLFESLGLSSVAVDNIHNHTVVFLGTSTGRLRKLTLLKNLTVANQW
ALKLPAGESVHHIMTFDPMDRNYLYLMTSHHLLRVKVAACGQYRSCSDCLGAGDAHCGWC
TLESRCSIQRECSGGLMVRSWIGMGEGPQQCPSMTLTPQEISLSADIKDVGILINGSVPD
LVGSRVECDYGLGVATVATVHLDYGPAQIQTCPLLPRERYPHIPPGRDHLMVPVAIKVNG
TSVVSGTFLIYDCERTGAIHPKIACISCLSTRWRCYWDQNSHSCLSTKDDSKPSLLENSA
SCPSLVAKDVPPSPSGITQDFTLSLSNVEQQEELECDFGSEQRYEARWLNSVSEVKCSGV
MLTTVERSQVFQLSLRRKGHLDKYIDSPKPMNVEVYNCGVGSGDCSQCWGREDQGHLCGW
CDNICRTRDDCQYMSSQCPDPEITKISPLSGPLEGGTLLTVQGRNMGRRADVVKVSIGMV
PCKILPYRYTVSVQLVCVSGQTFDPTNDVVRVTVNQNAMGVSKEVFSYLVPKLLSMKPSK
GSRSGGTRVTLRGEYLDTGSQVRVKVNGTQDCTILTLTKDTIECTIPAALHTHTEAVSVC
VEFEDIPCQSAELLTQYIYEKNPTISYIKPRKSYLSGGRTITVTGQGFDLVQSVSMEVLG
IGQDACKVQSPYMITCSSPASSQSQQATVEFLLNGVLYTGDGPAFDGPDQEEEEEPHGGH
FLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSVLELAPEEYSVMIGSYPCDISFH
NNQLFHCTINGSLGSSEGELPVTVRVGNFERIIAKVQLGGSELAIVVSIVVCCVLLLLCT
VALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIP
FLEYKQFVTRTFFPKMCSDYERSLVQPVYENDALGPRALPETHPLLQDWQPSDTAKPNME
EGITLFSTLLNNKHFLVTFVHALEQQKDFAIRDRCSLASLLTIALHGKLEYYTSIMKDLL
VDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINK
GSIDAITGKARYTLNEEWLLRENVEAKPQNINVSFQGCGMDSLAVKVVNTDTICQVKEKI
LEAFYKNLPFSQWPRAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIPEG
ASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDEPFENKKSHRQSHRKKVLPEIYLTRL
LSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNCL
PLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSVSDLQLGKDSPTNKLLYAKE
IPEYKKRVQCYYKQIHEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYRNQ
VVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggaaaagatagcagttctgattctcggcgttctggtgctagaatcgccc
tggaatgcccatcacagccttgccagcgcgctacagatccaacaggcgttcacctctcaa
aaccagacaaataactttgtggtggatgaggttagcagaaaagtctacctggctacggta
aacatggtgtaccagcttaacgggaccctgagtgtagaagtggagaagagaacggggccg
gtggaggacaacctgttgtgccatgcgccgcagctgccccaggcgccctgcgagcacccc
aaatccctcaccgacaacttcaacaagctgctcgaactggacagggagcagggggtgctg
gtggtatgcggctcggtgtaccagggcttttgtgagctcaggaagatggaaaacatatcg
gagatagccgtggagttcccccctcatggcgagaagaccgtgttccccagcatgctgaac
atcgccgccaaccaccctaacgcctccaccgtggggctcatcttcaggagccacgggggt
aacacccggctcctcgtcggggccacttacaccggggctgggacccagtttttccccaag
aaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgcaattcggtccctg
aacatcaatgatttatccaggctgttcacctatgacatcaacccgtccgaggacaacgtc
ttcaagataaaacaggaggtgaagcagaagaataaactaaacttcgttcatgccttcatt
cagaagagctacgcttatattgctatcaacaatgacgcgaatatgggccacaagcagagc
cagccgaacagcatccttgcaaggatatgcctggacactgagaacacacgaaaatccacc
tcggaaagccgaaagctcactgagtccttcatccagatgccgcttcagtgtggatataac
ggaaacatctacaaccggctggtctccgttcaccccgcggaaatccactccgggagcgga
gaggggctggaatcgcaccttttcggagtgttcaccaaatcagacagaaagtctgccctg
tgcgcttttcggttctcagatatcgaggaggagatccgtcagggccggaggaactgctca
aactcccccagcagcgatgtgcaggtgctggacagcgtcatccagggttcgggcgcagca
tgcgtacacaaagggaaccttgtgctgcaaccggagcaactggactgtggagcggcccac
ctgcagcacccactggccctacggaggcccctgagggccacgcccctgtttgagtccctg
ggcctcagctcggttgctgtggacaacatacacaaccataccgtggtgtttctgggcacc
agcacaggacgactgcgcaagctgaccctcctgaagaacctgactgtggccaatcagtgg
gctctgaagcttccagctggcgaatcagtgcaccacatcatgacctttgaccccatggac
cggaactacctgtacctcatgacctctcaccatctcctgagggtgaaggtagcagcatgt
ggccagtacagatcctgcagtgactgtttgggtgccggcgacgcccactgtggctggtgc
acgctcgagagcaggtgttccatccagagggagtgttccggggggctgatggtgcgctcc
tggatcggaatgggtgagggtccccagcagtgcccctccatgaccctcaccccccaagag
atcagcctctccgctgacatcaaggatgtggggattctgataaacggtagtgtccctgac
ctggttggttcccgggtagaatgtgactacggattgggcgttgccaccgttgccactgtg
cacctggactatggccccgcccagattcagacctgccccctcctgccccgggagaggtat
ccccacatcccccctggcagagatcacctgatggttcctgtggcgattaaggtgaatggc
acttctgtggtttccggtaccttcctcatctatgattgcgagaggacaggagcgatacac
cccaagattgcgtgtatcagctgtctaagcaccaggtggagatgttactgggaccaaaac
agccactcttgcctctccactaaagacgactccaaacccagcctgctggagaattctgct
tcctgtccaagccttgtggccaaggatgttccaccatcaccctcagggataacccaagac
tttaccctgtcgctaagcaacgtggagcagcaggaggagcttgagtgtgactttgggagt
gagcagcggtacgaggctcgatggctgaacagtgtctcagaggtcaagtgcagtggagtg
atgctgaccacagtggagaggagtcaggtgtttcagctcagcctgcggagaaagggacac
ctggacaaatacattgacagccctaaacccatgaatgtggaggtgtacaactgtggggtc
ggcagtggggattgttcccagtgttggggacgtgaggaccagggtcatctgtgtggctgg
tgtgacaacatctgtagaactagggatgactgccagtatatgagtagtcagtgtcctgac
cccgagatcaccaagatctcccccctgagtggaccgttggaggggggcaccctgctcacg
gtacagggcaggaacatgggccgcagggctgatgtggtgaaggtctccatcgggatggtt
ccatgtaaaatcttgccctaccgatacaccgtctctgtacagctggtgtgtgttagtggt
cagacctttgatcccacaaatgatgtcgtcagagttaccgtgaaccagaatgcaatgggg
gtgtccaaagaggtcttctcatacttggtccccaagctgctgtctatgaagcctagtaaa
ggctctcgttcagggggaaccagggtgaccctcaggggggagtacctggacactggctct
caggtcagagtcaaggtcaacggcacccaggactgcaccatactcacgctaaccaaagac
accatcgagtgcaccatacctgcggccctgcacacacacactgaggcggtgtcggtgtgt
gtggagtttgaggatattccctgtcagagcgctgagcttctcacccagtacatctatgag
aaaaaccccaccatcagctacatcaaacccaggaagagctacctcagtggcggtcggacc
atcacagtgacggggcaaggttttgacctggtgcagagcgtcagtatggaggtgctgggc
atcggacaggatgcctgtaaagtgcagtctccctacatgatcacatgctcctcccccgcc
tccagccaatcccagcaggccacggtagagttcttgctgaatggagttctctacacggga
gatggccccgcctttgacggcccagaccaggaggaagaggaggagcctcacggaggtcac
ttcctgttggagtatgtggaagatcctcagttcttcaccgccaacaaagagaagctgatc
aaacaccaccctggagaaccactcacactcatcatcaataaaggaccgagcgttctggag
ctggcaccagaggaatactcagtgatgattggctcctatccctgtgacatcagcttccat
aacaaccagctgttccactgtaccatcaatggttcgctgggctccagtgagggagaactg
cctgtcacagtgcgggtgggtaactttgagaggatcatagccaaggtgcagctgggaggt
agtgagctggccattgtggtgtccatcgtggtgtgctgcgtgctgctgctgctatgcact
gtggctctagtggtgtactgtactaagagccggagggcggagcgctactggcagaagact
ctgctgcagatggaggagatggagtcccagatcagagatgagatccgcaaaggctttgca
gagctacagacagacatgacagacctgaccaaggagctgaaccgcagccagggaatcccc
ttcctggagtacaaacagtttgtcacacgcaccttcttccccaagatgtgttcggactat
gagaggagtctggtccagcccgtctatgagaacgacgccctcggtccacgagccctccct
gagacacacccccttctgcaagactggcagccctctgacacagccaagcctaacatggag
gagggaatcactctcttctcaactcttctcaacaacaagcacttcctggttacctttgtt
catgcactggagcaacagaaggactttgcaatacgcgacaggtgtagcctggcatccctg
ctcactatcgccctccatggtaagctggagtactacaccagcattatgaaggatctgctg
gtggatctgatcgatgcctcggccgccaagaaccccaagctgatgctgcgacggacagag
tctgtggtggagaagatgctcaccaactggatgtccatctgtatgtacagctacctcaag
gagacagtgggcgagcccttcttcctgctactgtgtgccatcaagcagcagatcaacaag
ggttctatagacgccatcacagggaaggcccggtacacactgaacgaggagtggctgctc
agagagaacgttgaggccaagccacagaacatcaacgtgtcgttccagggatgtggtatg
gactctctggccgtgaaggttgtgaacacagacaccatctgtcaggtgaaggagaagatt
ctcgaggccttctataagaacctgcccttctcccagtggccccgggcagaggacgtagac
ctggagtggtttgcttctggtagtaacagcaggatcctccaggacctggataacacctct
gtgatggaggatggcaggaagaaactcaacacagtcacacattaccagatcccagagggg
gcgtcattcgccatgagcatgaaagacaagagagacaacaccctggggagagccaaagac
ttggacacagagaaatatgtacatttggtcttgcctcatgatgagccgtttgagaataag
aagtcccacagacagagtcatcgtaagaaggtcctccctgagatctacctaacccgcctc
ctctccaccaagggaacactgcagaagttcctcgatgacttgttccaggccatcctcagt
attcctgcagagcgtccgccgctggcaatcaaatacttctttgacttcctggaggagcag
gcggacaagaggggcatcaccgaccccgacaccctgcacatctggaagaccaactgttta
cctctgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacattgaaaag
acggaccacatggacgcctgtctgtctgtcattgcccaggccttcatagatgcctgctcc
gtttcagacctgcagctgggcaaggactctcccactaacaagctgctgtatgccaaggag
atcccagaatacaagaagagggtacagtgctattacaaacagatccatgagatggcgcca
ctgagtgagcaggagatgaatgcccacttggccgaggagtcacggaaatacagaaatgag
ttcaacaccaacctggccttgacggagatctacaaatacgccaagaaatacaggaaccag
gtggtgagtgctctggagtccaaccccacagcgaagcgtactcagctgcaccacaagttt
gagcaggtcattgctctggtggaggacaacatctatgagtgcagcagtgaggcctga
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integrated database retrieval system