Oncorhynchus keta (chum salmon): 118361833
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Entry
118361833 CDS
T09424
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118361833
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118361833
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
118361833
NCBI-ProteinID:
XP_052342471
LinkDB
All DBs
Position
29:complement(36737075..36775247)
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AA seq
1796 aa
AA seq
DB search
MKKSRGHKSDHGKGGRGDEAAILETEDLDFMGGGGGPDPDTISLASVTAVTTNVSNKRSK
PDIKMEPSAGRPMDFQVSVTVIEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGSFKLDVGTVYSHPEHQFFHKWALL
SDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKATETDEDDVEGNLLLPEGVPAERQWARY
YVKIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQILFAGQRGKTSIQKSSYEPIWN
EQIVFTEMFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKIANDGDKGFLPTLGPAWVNM
YGSTRSYTIMDEHQDLNEGLGEGVSFRARLLVSLGVEILDTSSPDIMSSTEVQVEGVPNI
SESATGKVEEFFLFGVFLEATMIDRKIGDKPISFEVTIGNYGSEIDGVTKPKSGSGKRSG
GDGDEEESELIQGSSDEEEGDDNDLVSVSSTPPMKPIITDRNYFHLPYFERKPCIYIKSW
WQDQRRRLYNANIMDNIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEDLGNGCSQFLTL
ANKDQNQTGRTKLDKERLKSCMRELESIGQQAKTIRTQVKKNTVRDKIKLVQNFLQKLRF
LADEPQHSIPDVYIWMMSNNKRIAYARVPSKDILYSGVDEETGKDCGKVKTIFFKLPGKK
GFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLPNGFEENKMLKGPGSQSAPPISLTYTMK
QIFQLRVHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLMVYDNVE
LFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPITKMADEHYGPPRFPPQLEYYQ
IYRGNCAAGEMLAAFELLQIGPHGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKYRIEV
LFWGLRDLKRVNLVTVDRPRVDIECAGKGVQSSLIQNYKKNPNFGTLVKMFEVDLPENEL
LHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFIYRAADKHANNLNTQEEIIVNYEPEPTI
KKLETMVKLDSGSDAVVKIEEDEKGGKKKKRKKGGDEVEEEEFDESMLDWWSKYFASIET
LMEILKAQEAAMVDAEEKEDQDIAADGEIKPDDSLVKGKRGKGKKEKKRAGPGDIPEKKK
HNIDELQVYPKELENEFDNFEDWLHTFNLFRGKAGDNDDQNMADEDRIIGKFKGSLCMYK
VPVSDEMQREMGFDSNMGMFQNIPTNDPINVLVRVYIIRATDLHPADINGKADPYIAIKL
GKSDIKDKDNYISKQLNPIFGKSFDIEATFPVDSTLTVSVYDWDLVGTDDLIGETKLDLE
NRYYSKHRAICGIPSKYAIHGYNVWRDPLKPTQILAKLCKEGKLDGPHYGPGGRVKVANR
VFMGPTEIEDENGLKKQTNEHLALTVLKHWEDIPRVGCKLIPEHVETRPLLNPDKPGIEQ
GRIEMWVDMFPKDMPAPGPAIDISPRRPKKFELRVIIWNTDEVILEDDDIFTGEKSSDIF
VRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRFIYPFDYLQAEEKIVISKKESMFAWDETE
YKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSINMVLNEKDIPMVSIF
KQMRIKGWWPFLARDENDEFELTGKVEAELQLMTAEEAEKNPVGEGRNEPEPLEKPNRPD
TAFLWFLMPFKAIKNLICNQYFWLTVKLVVALLLVLVLGLFIYSMPGYMAKKLMGV
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacggaaaaggaggaagaggcgatgaggca
gccatcttggagacagaggacctggacttcatgggagggggagggggtcctgaccccgac
accatctccctggcctcagtcacagccgtcaccactaatgtctccaacaagagatcaaaa
ccagacattaagatggaacctagtgccgggagaccaatggatttccaagttagtgttacc
gtcatagaggccaggcagctagtagggctgaacatggatccagtggtctgtgtggagatt
ggagacgataagaagtacactcagatgaaggagtcgacaaactgcccatactacaatgag
tattttgtctttgacttccacgtcccacctgatgttatgtttgacaagatcctgaagctg
tcggtaatccactccaagaacctcctgcgtagtgggactctggttggctctttcaaactg
gatgtaggcaccgtctactcgcatccagaacaccagtttttccacaaatgggcccttctc
tctgaccctgatgacatcactgccgggtgcaaaggttacattaaatgtgacatcgccgtc
gtggggaaaggagacaacatcaagactccacacaaggccaccgaaaccgatgaagatgac
gtagaaggtaacctcctgttacctgagggggttcccgcagagcgtcagtgggctcgctac
tatgtgaagatctacagagctgagggccttcccaagatgaacaccagcattatggctaat
gtcaagaaggctttcattggggagaacaaggaccttgtggacccttatgtacaaatactc
ttcgctggccagagggggaaaacgtctatccagaagagcagctacgagccaatctggaac
gagcagatcgtcttcactgagatgtttccaccgctctgcaaacgcatgaaggtccagatc
cgagactcggacaaagtgaacgacgtggccctcggaacacacttcattgacctgagaaag
atcgccaatgatggagacaaaggcttccttcccaccctgggtccggcttgggtgaacatg
tatggctccactcgtagctacaccatcatggacgagcaccaggacctgaacgagggtctg
ggggagggggtgtccttcagagcccgcctgctggtcagcctgggtgtggagatcctggac
acctcctccccggatatcatgagctccaccgaggtgcaggtggagggggtgcctaacatc
tcagagagcgccacagggaaagtagaggagttcttcctcttcggggtgttcctggaggcc
accatgattgacaggaagatcggggacaaaccaatcagcttcgaggttacgataggcaac
tatgggagcgaaattgacggcgtgaccaaacccaagtcgggtagcgggaagaggagtggg
ggagacggagatgaagaggagtcagagctgatccaaggctccagtgatgaagaggaggga
gatgataatgacctggtctccgtgtcctccaccccgcccatgaaaccgatcatcaccgac
agaaactatttccacctgccttactttgagaggaagccgtgtatttatatcaagagctgg
tggcaagaccagagaagaagactgtacaatgccaacatcatggacaacatcgcagataaa
ctggaggagggtctgaacgatgttcaggaggtcattaagacagagaaggcctatccggaa
cgcagactgagaggggtcctggaggatctcggcaacggatgcagtcaatttctgactctg
gctaacaaagaccagaatcagactgggaggaccaagctggacaaggagagactcaagtcc
tgcatgagggaactggagagcataggtcagcaggctaagaccatcaggacgcaggtgaag
aagaacacagtgagagataagatcaagctggttcagaacttcctccagaagctcaggttt
ctagctgatgagccgcagcacagcatcccggacgtctacatctggatgatgagtaacaac
aagcgtattgcctacgcccgtgtcccctccaaagacatcctgtactccggggtggacgag
gagaccgggaaggactgtggcaaagtcaaaaccatcttcttcaagctacctggtaagaag
ggctttggggcagctggctggacagtgcaggctaagacagagatctacctgtggctgggt
ctgaaccgtcagaggaaggacttcctgtctgggctgcccaacggcttcgaagagaacaag
atgctcaaaggacctggctcgcagtctgctccccccatcagcctcacatacacgatgaag
cagatcttccagctgagggtccatatgtaccaggctcgcagcctgtttgcagcagacagc
agcggcctctcagaccccttcgccagggtcttcttctccacacacagccaggtcacagag
gtgctgaatgagacactgtgccccacctgggaccagctgatggtgtatgacaacgtagaa
ctgttcggagaagtcggagaactgagggacgacccgcctatcatcgtcatagaaatctat
gaccaggacacggtgggcaaagcagagttcatgggcaggaccttcgccaagcctataacc
aaaatggcggatgaacactacggacctccacgtttccctccacaactagagtactaccag
atctatagggggaactgcgccgctggagaaatgctggcggccttcgaactgctgcagatt
ggtcctcatggtaaagctgacctgccgcccatcgacggtcccacagacatggaccgtggt
cccatcctacctgtccctctgggcatcagaccagtcctcagcaagtacaggatcgaggtg
ctgttctggggcctgagggacctgaagagggtcaacctagtcacggtggacaggcctcgt
gtggacatagaatgtgccggtaaaggagtccagtcttccctcatccagaactacaagaaa
aatcccaacttcggcaccctggttaagatgtttgaggtggatctgcctgagaacgagctg
ctccaccctcccctgaacatcagggtggtggactgcagagctttcggtcgttacaccctg
gtggggaaccatgctgtcaccaccctacgcaagttcatttaccgggcagcagacaagcac
gccaacaacttgaacactcaagaggagatcattgtcaactatgagccagagcccaccatc
aagaagttggagaccatggtcaagctggactctgggtctgatgctgtggttaaaatcgag
gaggatgagaaaggagggaagaagaagaaaaggaagaagggaggagatgaggtggaggag
gaggagtttgatgaaagcatgttggattggtggtccaagtactttgcctcgatcgaaact
ctgatggagattctcaaggctcaggaggcagctatggtggatgctgaggagaaagaggac
caggatattgctgctgacggcgagatcaaacctgatgactctcttgtcaaaggaaagaga
ggcaagggaaaaaaggagaagaagagggctgggcctggagacataccagagaagaaaaag
cacaacattgatgagctacaggtgtaccccaaggagctggagaatgagtttgataacttt
gaagactggcttcacaccttcaacctgttcagagggaaggccggagacaacgacgaccag
aacatggcggatgaagacaggattattggcaaattcaaaggttctctgtgcatgtacaaa
gtgccggtgtcagatgagatgcagcgggagatgggctttgactccaacatgggcatgttc
cagaacattccaactaatgacccaatcaacgtcctagtccgggtctatatcatcagggct
actgacctgcacccagcggatatcaatggaaaagcagatccctacatcgctatcaaactg
ggcaagtcagatatcaaagacaaagataactacatctccaaacaactcaaccccatcttt
ggcaaatcctttgacatcgaggccacatttcccgtcgactccacactaacagtgtccgtc
tatgactgggatttagtgggcactgacgacctgattggggagactaaactggatctggag
aaccgttactacagcaaacacagagcaatatgtggcatcccttctaaatatgccatccat
ggctacaacgtgtggcgggaccccctgaagccgacccaaatcctggccaagctgtgtaag
gagggtaagctggacgggccacactacggccctggaggacgggtcaaggtggccaaccgg
gtcttcatgggcccaactgagatcgaagatgaaaatggtctgaagaagcagacgaatgag
cacctggccctgacagtgctaaagcactgggaggacatccccagggtgggctgtaaactg
attccagaacatgtggagaccaggccactcctcaatcctgacaagcctgggatcgaacag
gggaggattgagatgtgggtggacatgttccccaaggatatgcctgcacctggacctgcc
attgatatttcacccaggagaccaaagaagtttgaactgagggtgatcatctggaacaca
gacgaggtcattctggaggatgatgacatcttcactggagaaaagtccagtgatatcttc
gtgcgaggctggctgaaaggtcagcaggaggacaagcaggacacagacgtccactaccac
tccctgacaggggagggtctcttcaactggcgcttcatctacccctttgactacttgcag
gccgaggagaagatcgtcatctctaagaaggagtccatgttcgcctgggacgagactgag
tataagatccctgctcgtctcaacttacaagtctgggatgctgaccacttctctgcagat
gattttttaggtgccattgagctagacctgaaccgtttccctcgtggagcgaagacagcc
aagcagtgttccatcaacatggtgctgaatgaaaaggatattcccatggtgtccatcttc
aaacagatgaggatcaagggctggtggcccttcctggccagagatgagaacgacgagttt
gaactcacggggaaagtggaagccgagctgcagctgatgactgcagaggaggctgagaag
aacccagtgggggaaggacgcaatgaacctgagcccctggagaaacccaaccgtccagac
acagccttcctatggttcctcatgcctttcaaagccatcaaaaacctcatctgcaaccag
tacttctggctcacggtcaagttagtggtggccctgctgctggtgctcgtcctgggcctc
ttcatctacagcatgcctggatacatggccaagaaactaatgggtgtctga
DBGET
integrated database retrieval system
