Oncorhynchus keta (chum salmon): 118362459 Help Entry 118362459         CDS       T09424                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04115   p53 signaling pathway oke04145   Phagosome oke04148   Efferocytosis oke04350   TGF-beta signaling pathway oke04510   Focal adhesion oke04512   ECM-receptor interaction oke04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     118362459   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118362459  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     118362459    04148 Efferocytosis     118362459   09143 Cell growth and death    04115 p53 signaling pathway     118362459   09144 Cellular community - eukaryotes    04510 Focal adhesion     118362459   09142 Cell motility    04820 Cytoskeleton in muscle cells     118362459  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118362459   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oke00536]     118362459 Membrane trafficking [BR:oke04131]  Endocytosis   Phagocytosis    Opsonins     118362459 Glycosaminoglycan binding proteins [BR:oke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118362459 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS EGF_3 TSP1_CFP_C cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  118362459 NCBI-ProteinID:  XP_035598693 LinkDB All DBs Position 29:21352283..21361780 Genome browser AA seq 1172 aa AA seqDB search MKLIGVFLLLVLWTCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQFKKTRGSILTVEKNDGSGPIFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSETLADV MTLDNPVNGSSPAIRTDYTGHKSKEIQQACGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMRIHSGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTRQRLCNNPTPKYGGKECQGDGKTS QRCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECKDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgataggagtatttctccttttggtgctttggacttgtgagggcagccgggta gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtgaaaggcgcagatccctacagcccagcctataaggtc ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaacttcaagcagtttaagaaaaccagg ggtagtattttgactgtggagaagaatgacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgctgacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcaatcatgcgcaataagggatgccaaagctctgaaacattggctgatgtc atgaccctggacaacccagtcaatgggtctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggcctgtggcttttcctgtgaggatatcaccagcatg ttcaaggagctcaagggactcggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgagaatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacgggga atccagcagagaggtcgatcatgcgatcgcatcaacagcaactgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaagcaggatggtggctgg agccactggtctccctggtcctcctgctctgtgacctgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagaaaccgaggtctgccagaaatcaccatgtccaattgatggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcgccagcgtctt tgtaacaaccccacccccaaatacggaggaaaggaatgtcagggcgacggcaaaacatcc caacggtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggtgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaatggagtccaccgctgtgagaacactgagcctggttacaactgcctt gcctgcccccctcgctactccggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaaccaggttacgctggcaacggccacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctgtgtgtggagaatgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaacgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggtgatggcattctaaatgagagggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgcgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aatgccaaccaggccgaccacgacaaagacggcaagggtgacgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac attcttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccactagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcatcagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacattctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacctactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggaacatctgaggaac gccctctggcacaccggtgacactgctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacactgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggccgattccggaaatatc tacgacaagacctatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcaaagattcttaa

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