KEGG   Oncorhynchus keta (chum salmon): 118362713
Entry
118362713         CDS       T09424                                 
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04620  Toll-like receptor signaling pathway
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118362713
   04621 NOD-like receptor signaling pathway
    118362713
   04622 RIG-I-like receptor signaling pathway
    118362713
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118362713
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 PEA2_C NOCA1_mid Sina_ZnF CCDC39 BLOC1_2 zf-TRAF_2 CALCOCO1 zf-RING_UBOX CCDC18_1st DUF1664 zf-RING_6 RBSN_mid Pex17 RON4 Snapin_Pallidin Rod_CreS Spc7 DNA_topoisoIV Fez1 FapA TolA_bind_tri
Other DBs
NCBI-GeneID: 118362713
NCBI-ProteinID: XP_035599169
LinkDB
Position
29:31424052..31444255
AA seq 573 aa
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISDQLSKPNPVCPEDKEPLFKDKVFRDVCCHREIM
ALRVYCRSEKNGCKEKISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgatcagctaagcaaaccgaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagaagatcagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacgagtcatcaacatgagtgtcccaaggctcatgtcacctgc
tcttttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccagaaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccgggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtggagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggagggcggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgactagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggagacggcatggggaaaggaacccacttgtcgctgttcttc
gtggtgatgcgtggcgagtacgatgcccttctgctctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcaggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga

DBGET integrated database retrieval system