Oncorhynchus keta (chum salmon): 118363115
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Entry
118363115 CDS
T09424
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04012
ErbB signaling pathway
oke04020
Calcium signaling pathway
oke04068
FoxO signaling pathway
oke04510
Focal adhesion
oke04518
Integrin signaling
oke04540
Gap junction
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118363115 (egf)
04012 ErbB signaling pathway
118363115 (egf)
04068 FoxO signaling pathway
118363115 (egf)
04020 Calcium signaling pathway
118363115 (egf)
09133 Signaling molecules and interaction
04518 Integrin signaling
118363115 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118363115 (egf)
04540 Gap junction
118363115 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118363115 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oke04052
]
118363115 (egf)
Cytokines and neuropeptides [BR:
oke04052
]
Cytokines
Growth factors (RTK binding)
118363115 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_3
DUF5050
EGF_MSP1_1
Vgb_lyase
SGL
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
118363115
NCBI-ProteinID:
XP_052344446
LinkDB
All DBs
Position
30:46188563..46216594
Genome browser
AA seq
1206 aa
AA seq
DB search
MLVVTVAAVLVYFSVQKDGASAAPGKACWLGNPSGVDNGSCVAPEPYLIFGHGKAIYRMD
LDGGNQKRVVTGVGNSILLDFHYTEGRVYWADKKTGVIYKAAMDGTQRQKLHSSEKGISG
LAVDWVHNFVIWTSGEVGSIKRVDTDGRNERTLLRHLSQPISIAVAPNDRFIFWLSDGIT
PSIQRSDVAGEMITTVLKIPERLGGLSVDRTDKRLFWVQFSLEGESAIGSCDYNGNVVNV
IDQPLLSQSLGMSVFLEQVFYTDMSSRTIRQVNKYSGVEAENINLKRMTHPPTAVKVVHP
LNQPIEDSMPVFPVCDGRTGVCVNVCSNPAEQGICQCTKGFALSKHGNYCEDVNECGLWD
HGCSLGCENIPGSYFCTCPKGYALLPDRKTCHETSPCLANMTQCDNGCLATGEGTICVCP
EGSLLQPDGQTCRGCTSSDRGGCSQQCSPITPGRWECDCLPGYKLHQDGKRCTATGPPPY
LLFANIVNIRRVNLDGTGDQSLVEEPSGTVIALDYDPVQNKVYFASTVLKQIERADLDGG
SREVLLTEELDSPEGLAVDWVNRKLYWTDRGLSTIDRSTLDGFDRETIISKGIQKPRGIA
VHPLAKKLFWTDMGTRPVLESASLEGSDRAVIASADLVSPSGLTIDFTEDRLYWCDSKRG
VLETASLDGSNRQVLTENEVGQPFDLAVFEDRLWITDREQQLLLSIDKWTGMDPERLHGN
MVQPASIVVVHPLAKPGANVCLYRNGGCAQVCESRLGFAHCSCHSHIAQSADGKGCLPSY
RSTDSGDGESADPFSLKNKTLNDESMPLPVPGLSTDGEEAEDNMDEGSEPTLFIEKMVSD
QDDCFSLRCDVNAQCLLDGGNPTCHCLEGFTGDGELCVDLDECMLGMALCSIQSSVCVNT
AGGYYCQCRPGFSGEEHHCTDFDECKMGTHKCDERAECINTIGKYRCKCQAGYSGNGHTC
QELSTTSSWVTTSRPMDVTSQWLNTNTVESCPSSHDTYCLYEGVCFYFPEMESYACKQVP
LFPSFCISGYMGERCQFSDLEWWELQQAEQEKRRNVAIALGMVVLITLLSIAACVTYCYG
SRRFVRKHPSVDDMSDTSTSDDTMSETTVPKTPRFYVVLEHGGDGKVIHVMGCPRRAVCP
SCSSETGESFVSEEAVAIPKLNKGYECSFGLATMETNKTGANHLKSIDNLIFLDDPQPAS
AIPQLT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgttggttgtgacggtcgcagcagtgctggtctatttctcagtgcaaaaagacggagcc
tcagcggcccctgggaaggcatgttggctcggaaacccgtcaggtgtggataatgggagc
tgtgtggctccagagccctatctgatcttcggccatggtaaggctatataccggatggac
cttgatggagggaatcaaaaaagggttgtgaccggtgttggaaactctatcctactggac
ttccactacacggaagggagagtttactgggccgataaaaagacaggggtcatctacaaa
gcagcgatggatggaacacagagacagaagctgcactcgtctgagaaagggatctcaggc
cttgcggtcgactgggttcacaattttgtcatttggaccagtggagaagtgggaagtatc
aaaagagtggatacagatgggagaaatgagaggactcttctaagacatttatcgcagcca
atctccatagcagttgcaccaaatgacagatttatattctggctgtctgatggaatcaca
cccagtattcagaggtcggatgtcgcgggagagatgattactacagtgctgaagattccg
gagagactgggagggctgtcggtcgaccggacggacaagagactgttctgggtccagttc
agtctggagggagaaagtgccattgggtcgtgtgactacaacgggaatgttgtcaatgtc
attgaccagccactactgtctcagtctttggggatgtctgtgttcctggagcaagtcttc
tacactgatatgagttcacggaccatacggcaagtcaataagtactcaggggttgaggca
gaaaacatcaacctaaagcgaatgacacacccccctactgctgtcaaggtggtacatccc
ctcaaccagccgattgaagactccatgcctgtctttccagtgtgtgatggtcgtacagga
gtgtgtgtgaatgtgtgctccaacccagctgagcaggggatctgccagtgcactaaaggc
tttgcccttagcaaacatgggaactactgtgaagatgtcaatgagtgtggcctgtgggac
cacggctgttccctgggctgtgagaacattccaggctcctacttctgcacctgccccaag
ggttacgctctgcttcctgataggaaaacctgccacgagacctcaccatgtctggccaat
atgactcagtgcgataatggatgtcttgctactggtgaggggaccatctgtgtgtgtcca
gaggggtccctactacagccggatggacagacctgcagaggctgcacctcttccgaccga
gggggctgtagtcagcaatgttcccccatcactcctggtaggtgggagtgtgactgtctg
cctgggtacaagctccaccaagacggtaaacgctgcacagccactggacccccaccttat
ctgctgtttgccaacatagtaaacatcagacgtgttaatctggatgggactggtgaccaa
agccttgtggaggagccgagcggaacagtaatagctctggactatgatcccgtacaaaac
aaagtgtactttgccagtacagtactgaagcagattgagcgtgctgatttggacggcggg
tccagggaggttttgctcactgaggagttggactcacctgagggcctggctgtggactgg
gtcaaccgcaagctctactggactgaccgaggcctctcaactattgaccgcagcactttg
gatggcttcgacagggagaccattattagcaaaggcatacagaaaccaaggggaattgca
gttcatcctttagccaagaagttgttctggaccgatatgggtaccaggcctgtgttggag
agtgcgtctttggaaggaagtgatcgtgcggtcatcgcaagtgccgacttggtgtcccct
agtggtctgaccattgacttcactgaagacagactgtactggtgtgacagcaagaggggc
gtactggagacggcatccctggatggctccaaccgacaagtcttgacagagaacgaagta
ggtcaaccttttgacctggcagtgtttgaggacaggttgtggatcacggacagggagcag
cagctgctcctgagcattgacaaatggacagggatggacccagagcgtctccatggcaac
atggtccaaccagcatctatagttgtggttcaccccctcgccaagccaggagcaaatgtt
tgtctctatcgaaatgggggctgtgctcaggtgtgcgagagcaggctaggattcgcccac
tgctcctgtcactcacacattgcccaatcagctgatggcaaaggctgcttgccatcctac
agatcaacagattctggagatggtgagtctgcagacccgttctctctgaaaaacaaaact
ttgaacgatgagagcatgcctctccctgtgcctggtctctctactgacggggaggaggca
gaggacaacatggacgaagggagtgagcccacactcttcattgagaagatggtgtcagac
caggatgactgtttctctctccgctgtgatgtgaatgcgcaatgtctactggatggaggc
aaccccacctgccactgcctggaaggtttcactggggatggagagctgtgtgtggacctt
gatgagtgcatgttggggatggccctgtgtagtatccagagctcagtgtgtgtcaacact
gctggtggatattactgccagtgtcgccctggcttcagtggagaggagcaccactgtacc
gattttgacgagtgtaaaatgggaacacacaaatgtgatgagcgagcggaatgcatcaat
actatagggaagtaccgctgcaagtgtcaagctggctacagtggtaatggacacacatgc
caagagttgtcaactacgtcctcgtgggtgaccaccagtaggcctatggacgtcaccagc
caatggctgaacactaacacagtggagagctgcccctcatctcatgacacttactgtctc
tatgagggagtttgcttttacttcccagagatggagtcctatgcctgcaagcaagtaccc
ctattcccctccttctgtatctcgggctacatgggagagcgctgtcagttcagtgatctg
gagtggtgggagctgcagcaggccgaacaagagaagagaaggaacgtggccatcgccctg
ggcatggttgtcctcatcaccctgctctccattgctgcctgcgtcacctactgctacggg
tccaggagattcgttcggaaacacccctcggtggatgacatgagcgacacaagcaccagt
gatgacaccatgtcagagaccaccgtccccaagacgccacggttctatgttgttttggaa
cacggtggcgatggaaaggtcattcacgtcatgggctgtccaagaagagctgtttgtccc
tcttgctcctccgaaacaggtgaaagctttgtgtcagaggaggcagtggctattcccaaa
ctcaataaagggtatgagtgctcttttggattggctaccatggagacgaacaagacgggc
gccaaccacctcaagtccatcgacaacctcattttcctggatgaccctcagcctgcctct
gccatccctcagctcacctga
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