Oncorhynchus keta (chum salmon): 118363159
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Entry
118363159 CDS
T09424
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118363159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118363159
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118363159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
118363159
NCBI-ProteinID:
XP_052344507
LinkDB
All DBs
Position
30:54399907..54488836
Genome browser
AA seq
1303 aa
AA seq
DB search
METSAPTTTEKKGSGLDGNGFTDLPRKLSPSAVTRAPHHVFPTFHTPIPIDMRHHDGRYH
YEPHTLHAMHGPGLGGSPVMSDISLIRLSHHAAGTGESPFSPAHPYFNPHMEHYLRSIHS
SPTLSMISAARGLSPADLAHEHLKERGLFGFPPPPPGASPAEYYHLMTSHRNPYGELLMQ
GGAAAAAHLPDYITPMEASRFPSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPNSLV
AYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPPLIQ
PPPIFSSRQSALGLSSLAPASHNHNNGSQSKNTCGDSAVSSTVNPMITKRSKVKTEVEYP
RPRSPCSPDHLSGMLGLKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHHINND
HIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLK
THLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDPSSL
RKHVKTVHGPEAHVTKKQRSDLPPSRPVPPKENGENEIGRGTEEKMDSTSRGMEDYLQVK
SIKTEKSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSGGGSMGDLTGLDDPSGP
LMDSSFSGLSSGTAGVGVGLHLRQHLGLSHIHGLEHLKKEKLKTARDSCQWANHHPAPPV
QNTKLPPIPASGSLLESGNMCGGPGSFSLSELCSSKVTVLNQLDHLMERRDSATSTISSA
YISRRSSGISPCYSSRRSSDASAFSGHRHHNISSTGSYDPISADLSRRSSDASQCGGGGG
GGRLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCLALYRDASQGDSSSC
YSSFDPVVPSGVPRRCSGDMGNYNGRSMMPHEAPSNLPRRASDPVPRRPSLDPLSPLSHQ
PQVQHYNSTGNMQNLHPHASLPIQALSAAERRHLVLQSHQPRSDDSLQRYPYCPRPPSIS
ENVAMETMAGDMSGRRNSSEEEMMVLPDDVVHYITAQGGAGESDCANGYNRQAQCGFHGN
TINPNPQQQQQFYHQGRMAVVDTNMSMNPSSAPQTKRLSCALSPGHPKQSFPSSLSKTST
MPVQWNEVSSGTVEALHNPTQHLPFGRSNSKLAMVQQKQNFVSFQKQNLNSNQHIAQINH
NLAHAAQQGRYIQQQKTDSRLGCVQQQSLQQQQPANANLNERVRLEYGFNQGLGPIDANA
NQRSSCSSMAVGGTVHSVDTQNSRLRTQPGGVNRLKSHLRIAV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcggccccgacgaccacagagaagaaaggctctggtctggatggaaacggc
ttcactgacctcccgaggaaactctcaccttcagctgtcaccagagccccgcaccacgtc
ttcccgacgttccacacgcccatcccgattgacatgcgtcaccacgatggaagatatcac
tatgaaccccacaccctacatgccatgcatggtcctggactaggtggcagcccggtcatg
tcagacatctctctgatccgtctgtcccaccacgcagccgggacaggggagtcccccttc
agccccgctcacccctacttcaaccctcacatggagcactacctccgctccattcacagc
agcccaaccctgtccatgatctctgcggcccgcggactcagccctgcagacttggcacat
gaacacttgaaagagcggggtctgtttgggtttccccctccccctcctggagccagccct
gctgagtactaccacctgatgaccagccatcgtaacccctacggagagctgctgatgcag
gggggtgcggcggcagctgcacacctgccagactacatcacccccatggaagcgtcacgg
ttccccagtcccagactgacccccaggctgaacagaaagcgagccctgtccatctcgcct
ctctcagacgccagcattgacctgcagaccatgatccgtacctcgcccaactctctggtg
gcctacatcaacaactcacgctccagctctgcagctagcagctcctacggacacctctct
gttggaggcatcagtccgtcctttaccttcccccatcacatcaaccccatggcctaccag
cagctcctgtcccagcagagaggcctgagtgtgttcggccacacccctcctctcatccag
cccccacccatcttctccagtcgccagtctgccctgggtctctcctctctggcccccgcc
tcacacaaccacaacaatggctcacagtcaaagaacacatgtggggactcggcagtgagc
agtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtggagtatccg
aggccgcggtccccatgctctccagatcatctaagtgggatgctgggcctgaaggaggac
ttggataaagatgaatgcaagcatgagccagagatggtgtatgagaccaactgccactgg
gaaggatgctccaaggagtacgacacgcaggaacaactggtccatcacatcaacaacgac
cacatccatggggagaagaaggagtttgtgtgccgctgggatgagtgttccagggagcag
aagccttttaaggcccagtacatgctggtggttcacatgaggagacacacgggggagaag
ccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggagaatctgaag
acccacctgcgatctcacaccggggaaaaaccatatgtgtgtgaccacgagggatgcaac
aaagccttctccaacgcctcggacagagctaagcaccagaatcgcacacactccaacgag
aaaccctacgtgtgtaaagtccccggctgtacgaagcgctacacggaccccagctctctc
aggaagcacgtgaagacagtccacggaccagaggcccacgtcaccaagaaacagcgcagc
gacctgccgcccagcagacccgttccacccaaagagaatggagagaacgagataggccgg
ggcacggaggagaagatggacagcacctcgagaggcatggaggactacctgcaggtcaag
tctatcaagacggagaagtctgtgatgtatcagtccagccctggtggtcagtcatcatgt
agcagcgagccgtcgccacttggcagttccaccaaccatgacagtggagtagagatggcc
ctccacagcggcgggggcagcatgggggacctgactggactggacgacccctcggggccc
ctcatggactcctccttctctggcctctcgtctgggacagcaggggtcggggtgggcctc
cacctacgtcaacacctaggcctcagccacatccacggactagaacacctgaagaaggag
aaactgaagacggcgagggactcctgccagtgggccaatcatcatccagctcctccagtc
cagaacaccaagctaccgcccataccagcaagcgggtcccttttggagagtggaaatatg
tgtggcgggcctggatcgttcagcctcagtgagctgtgttccagtaaggtgactgtcctg
aaccagctggaccatctgatggagcgcagggacagcgccaccagcaccatctcctctgcc
tacatcagccgccgctcctctggcatctccccctgctactccagccgccgctccagcgac
gcctccgcgttcagtggccaccgccaccacaacatcagctccaccggctcctacgacccc
atctctgcagacctgtcccgccgctccagcgacgccagccagtgtgggggtggtggagga
gggggacggctgcccagtcacctcagcctcacccccgcccagcactaccacctcaaggcg
aaatatgcggcggctacaggcggagccccacccacacctttacccaacatggagaggatg
agtctcaagacctgcttggccctctacagggacgcttcccagggagactcgtcgtcttgt
tactcctccttcgaccccgttgtccccagtggggttcccaggcgctgcagcggcgatatg
ggaaactataacggccgcagcatgatgccccacgaagctccgtccaaccttccccgtcgg
gctagcgaccccgtcccccggcggccgtccctggacccgctgtccccgctgtcccatcag
cctcaggtgcagcactacaacagcacgggcaacatgcagaacctccacccacacgcctcc
ctgccgatacaggccctgtctgcagccgagcggcgccacttggtgctccagagccaccag
ccgcgctccgacgacagcctgcagcgatacccctactgcccccggccgccaagcatctct
gagaatgtggccatggagaccatggccggcgatatgagcggtagacgcaacagcagtgag
gaggagatgatggtacttccggatgacgtcgttcactacatcaccgctcagggcggagct
ggtgagtcagactgtgccaacgggtacaaccgacaagcacaatgtggtttccatggaaac
acaataaaccctaacccccagcaacaacagcagttttaccaccagggaaggatggctgtg
gtggacaccaatatgagtatgaacccttcgtctgcaccacaaaccaagcgcctctcctgt
gccctaagcccaggccatccgaagcagtctttcccctcctcactcagtaagacaagcacc
atgccggtacagtggaatgaggtcagctcagggactgtggaagctcttcacaacccaacc
caacatctgccgtttggtcgaagcaactcaaaactcgccatggtccaacagaaacagaac
tttgtctcgttccagaagcagaatcttaattccaaccaacacattgcacagattaaccac
aacctggctcatgcagcccagcaggggagatacatacagcagcagaagacagactccagg
ctgggctgtgtccagcaacagagcctacagcaacagcagcccgctaatgctaacctcaat
gaacgagtgagactcgagtatgggtttaaccagggtctcggtcctattgatgctaacgct
aaccagcggtcctcctgtagtagtatggcagttggtggcacagtgcacagtgtagacacg
cagaacagccgactgaggacgcagccagggggagtcaatcgtctcaagtcacatttaagg
atagcggtgtga
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