Oncorhynchus keta (chum salmon): 118363234
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Entry
118363234 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04210
Apoptosis
oke04217
Necroptosis
oke04510
Focal adhesion
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118363234
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118363234
04217 Necroptosis
118363234
09144 Cellular community - eukaryotes
04510 Focal adhesion
118363234
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118363234
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118363234
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118363234
03029 Mitochondrial biogenesis [BR:
oke03029
]
118363234
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118363234
Peptidases and inhibitors [BR:
oke01002
]
Peptidase inhibitors
Family I32: IAP family
118363234
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118363234
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118363234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
118363234
NCBI-ProteinID:
XP_035599795
LinkDB
All DBs
Position
30:complement(15073704..15086381)
Genome browser
AA seq
467 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDESTYPMVPHMVSEDSRFNTLGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWEPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREEEVGETRPRPGPRVPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAKH
YPGCNFLLTEKGQEFVSSVQLQGPGWNTAASSHLNGCSSHGTEVLRSAMAQRAVEMGLEP
ALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPFEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCAAITQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggaa
aggctggcccgtgctgggttttacttcacaggacaggctgacaaggtgcgctgtttcagc
tgccacaaaactgtagagaactggtgtggaggggacacacccgcagagaggcacgcggag
gtctcccccaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaacgaagacgcagaggacatggagttccgc
ctgagaacgggagaggtggtggatgagtccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttaggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagtgaccgggtgcagtgcttctgc
tgtggagggatgctggggggctgggagcctggggacacggcgtggggggagcactccaaa
cacttcccctactgcttcttcatactggggcatgatgtggggaacctcccctctcaggcg
gggagagaggaggaggtaggggagaccaggccacgcccgggtcctcgggtccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctccagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagccggacgagaatccctgggaggagcacgccaaacac
tatccggggtgtaattttctgctgacagagaaaggacaggagtttgtcagcagtgttcag
ttacaaggtcctggctggaacactgctgcttcaagtcacctgaatggatgttcaagtcac
ggaacagaggtgctgaggtcagccatggcccagagggcggtagagatgggtctggagcct
gccctggtagagaggaccatactggagaggatacgcagagctgggacaggctactccacc
ctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgca
gagaaccatgatgaggatccctttgagaagctacggaagctgcagagggagaaacagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtgcagccatcacacaa
aagatcaagacatacatctcctaa
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